Pairwise Alignments

Query, 320 a.a., diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 305 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  171 bits (432), Expect = 3e-47
 Identities = 119/315 (37%), Positives = 172/315 (54%), Gaps = 28/315 (8%)

Query: 4   LVVEDAKTSLAVVCHHLERLGNIPVPASCGAQAIELFQSE-RPDLVLLDVVLPDMDGYTV 62
           LVV+D KT+L ++   L+ L  I + AS GAQ ++L +SE +PDL+LLDVV+PD+DGY V
Sbjct: 8   LVVDDVKTNLMIMGQSLKGLYQI-LEASSGAQCLKLARSEPQPDLILLDVVMPDLDGYEV 66

Query: 63  ARRIRDLEKPGEWTPIIFLTAMSGDADLEKGIAAGGDDYLQKPVSDVVLRAKIRAMQRIV 122
            R ++      E  PIIF+T    D D + G+  G  DY+ KP+   ++RA++ A  ++ 
Sbjct: 67  CRALKSDPATAE-IPIIFVTGKDSDEDEQYGLELGAVDYITKPIRPAIVRARVCAHIQLK 125

Query: 123 QMRHSLLVLTRKLDAANQELKRLSAVDGLTGVANRRMFDEALEREWRRSMRQGTELAIVM 182
           Q R                L+ ++  D LTG+ NR    E   +   R  R    + +V+
Sbjct: 126 QQR--------------DRLQSMAMHDQLTGLYNRHFLIECASQRLARVARHRNPMTLVL 171

Query: 183 CDVDFFKKFNDTYGHQAGDECLKKVASAMAKAMERGGDLLARYGGEEFSIILPDTKLGGA 242
            DVD FK+ ND YGH  GD+ L +VA  ++  M R  D++AR GGEEF ++L D  L  A
Sbjct: 172 MDVDHFKRVNDNYGHHVGDKVLIEVARLLSTNMRR-EDVVARLGGEEF-VMLMDCSLDNA 229

Query: 243 AFVAERMRHSVAQLKMPHAGSHHGQVTISCGVSAFVASPETSP-EALLLAADQALYQAKQ 301
           A   E +RH +  L+         +VT S G+    ASP  +    LL+ AD  +Y+AK 
Sbjct: 230 AAKVEHLRHLLEALEPDGI-----KVTGSFGL--VEASPYNADFSHLLVLADDGVYRAKT 282

Query: 302 AGRN-QVCRMSTAPA 315
            GRN  VC  + APA
Sbjct: 283 QGRNCVVCHRAEAPA 297