Pairwise Alignments

Query, 239 a.a., DNA polymerase III, epsilon subunit from Dechlorosoma suillum PS

Subject, 242 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella amazonensis SB2B

 Score =  223 bits (568), Expect = 3e-63
 Identities = 122/235 (51%), Positives = 158/235 (67%), Gaps = 10/235 (4%)

Query: 2   RQIFLDTETTGLEHKQG-----HRIIEVAGVEMVNRRLTNRHFHKYINPERAIDEGAQAV 56
           RQI LDTETTG+    G     HRIIE+  VE+VNRRLT R FH+YINP +AIDE A AV
Sbjct: 9   RQIILDTETTGMNQGAGAVYLGHRIIEIGCVEVVNRRLTGRTFHQYINPGQAIDEEAIAV 68

Query: 57  HGISLEFLADKPKFAAIAADFLDFIRGAELVIHNAAFDVGFLNAELARL--KLPPVGEVC 114
           HGI+ + +A +P+F  I   FLDFIRGAELV HNA+FD+ F+N E + L  + P V ++C
Sbjct: 69  HGITNDRVAGEPRFHEIVGGFLDFIRGAELVAHNASFDMSFINHEFSMLVPQGPKVEDIC 128

Query: 115 SGVVDTLKMAKEMHPGKKNNLNALCDRYEVDNSHRTLHGALLDAEILAEVYVAMTRGQES 174
           + V+D+L +AK +HPG+KNNL+ALC RY +DN+ RT HGALLDAEILA+VY+ MT GQ  
Sbjct: 129 T-VLDSLAIAKFLHPGQKNNLDALCKRYGIDNTRRTYHGALLDAEILADVYLVMTGGQTK 187

Query: 175 LMIDLGQAPAAAAEIAMSTGQRRPTRVLRASIEELAAHEQVLAGINKESKGKCLW 229
             +   +       I      R   +V+RA+ +EL  HE+ L  + K   GKCLW
Sbjct: 188 FNLHADEGSQEQGGIIRLDSNRPSLKVVRATADELGNHEKRLDLVGK--SGKCLW 240