Pairwise Alignments

Query, 239 a.a., DNA polymerase III, epsilon subunit from Dechlorosoma suillum PS

Subject, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score =  223 bits (568), Expect = 3e-63
 Identities = 121/235 (51%), Positives = 158/235 (67%), Gaps = 10/235 (4%)

Query: 2   RQIFLDTETTGLEHKQG-----HRIIEVAGVEMVNRRLTNRHFHKYINPERAIDEGAQAV 56
           RQ+ LDTETTG+    G     HRIIE+  VE++NR+LT RHFH+YINP +AIDE A  V
Sbjct: 9   RQVILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQAIDEEAITV 68

Query: 57  HGISLEFLADKPKFAAIAADFLDFIRGAELVIHNAAFDVGFLNAELARL--KLPPVGEVC 114
           HGI+ EF+ADKP FA IA  FL+FI GAE+V HNA FDV F++ E + L  + P   ++C
Sbjct: 69  HGITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDIC 128

Query: 115 SGVVDTLKMAKEMHPGKKNNLNALCDRYEVDNSHRTLHGALLDAEILAEVYVAMTRGQES 174
             V+D+L++AK +HPG+KNNL+ALC RY +DNS R LHGALLDAEILA+VY+ MT GQ  
Sbjct: 129 Q-VLDSLEIAKFLHPGQKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLIMTGGQTK 187

Query: 175 LMIDLGQAPAAAAEIAMSTGQRRPTRVLRASIEELAAHEQVLAGINKESKGKCLW 229
             +   +    +  I      R   +V+ AS +EL  HEQ L  +  E  G+C+W
Sbjct: 188 FELSNEKPGQESGGIIRLANNRPSLKVIGASADELNMHEQRLDLV--EKSGQCIW 240