Pairwise Alignments

Query, 239 a.a., DNA polymerase III, epsilon subunit from Dechlorosoma suillum PS

Subject, 242 a.a., DNA polymerase III, epsilon subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  209 bits (531), Expect = 5e-59
 Identities = 114/235 (48%), Positives = 155/235 (65%), Gaps = 10/235 (4%)

Query: 2   RQIFLDTETTGLEHKQG-----HRIIEVAGVEMVNRRLTNRHFHKYINPERAIDEGAQAV 56
           RQ+ LDTETTG+    G     HRIIE+  VE++NRRLT R++H+YINP +AID  A AV
Sbjct: 9   RQVILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYYHQYINPGQAIDPEAIAV 68

Query: 57  HGISLEFLADKPKFAAIAADFLDFIRGAELVIHNAAFDVGFLNAELARLKL--PPVGEVC 114
           HGI+ E +A++P+F  IA +F+DFI GAE+V HNA FDV F++ E + L+   P   ++C
Sbjct: 69  HGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPLGPKTRDIC 128

Query: 115 SGVVDTLKMAKEMHPGKKNNLNALCDRYEVDNSHRTLHGALLDAEILAEVYVAMTRGQES 174
             ++D+L +AK +HPG+KNNL+ALC RY +DNS R  HGALLDAEILA+VY++MT GQ  
Sbjct: 129 E-ILDSLDIAKFLHPGQKNNLDALCKRYGIDNSRRHYHGALLDAEILADVYLSMTGGQTK 187

Query: 175 LMIDLGQAPAAAAEIAMSTGQRRPTRVLRASIEELAAHEQVLAGINKESKGKCLW 229
             +   +       I          +V+ AS +EL  HE+ L  + K   GKCLW
Sbjct: 188 FNLSNEEVGQEGGGIQRFDPTSLNLKVICASADELVMHEKRLDLVAK--SGKCLW 240