Pairwise Alignments

Query, 616 a.a., excinuclease ABC, C subunit from Dechlorosoma suillum PS

Subject, 629 a.a., uvrABC system protein C from Phaeobacter inhibens DSM 17395

 Score =  459 bits (1180), Expect = e-133
 Identities = 257/622 (41%), Positives = 369/622 (59%), Gaps = 13/622 (2%)

Query: 4   SPEATAPAAGPAAPAFDAKTFLATLTDLPGVYRMLDAEGKVLYVGKAKNLKKRVSSYFQR 63
           SPE   P           + +L TL   PGVYRMLD+E +VLYVGKA+NL+ RVS+Y  R
Sbjct: 9   SPETARPTHRTGYAVI--QDYLKTLDSSPGVYRMLDSESRVLYVGKARNLRARVSNY-SR 65

Query: 64  TVSSPRIALMVSRICGIDTTVTRSEAEALLLENNLIKSLDPPFNILFRDDKSYPYVQLTR 123
              SPRI  M++    +    TR+E EALLLE NLIK L P +N+L RDDKS+P + + +
Sbjct: 66  PGHSPRIERMIAATASMMFLTTRTETEALLLEQNLIKQLKPKYNVLLRDDKSFPNILVAK 125

Query: 124 DQ-FPRLAFFRGAPDRKADYYGPFPAASVVRDSIHLLQKTFHLRTCEDSVFANRSRPCLL 182
           D  FP++   RG    K  Y+GPF +A  V  +++ LQK F LR C +++F +R+RPCL 
Sbjct: 126 DHAFPQIKKHRGTRREKGSYFGPFASAGAVNRTLNQLQKAFLLRNCTNAMFESRTRPCLQ 185

Query: 183 YQIHRCSGPCVGLISAEDYAKDVQLAAMFLKGKQHEVIQRLTEAMEQASMALAFEQAAVL 242
           YQI RC+ PC G ISAEDYA  V+ A  FL G+  ++ + L E M  AS A+ FE+AA L
Sbjct: 186 YQIKRCTAPCTGEISAEDYASSVRDAERFLSGRSTKIQEELAEQMAAASEAMEFERAAAL 245

Query: 243 RDRIQGLRRIQEKQYVDSGRDEDADVVVAVQESGMLCLNLAMIRGGQHLGDKPLFPKNAA 302
           RDRI+ L ++Q  Q ++     +ADV+    +SG  C+ +  IR  Q+ G++  +P+   
Sbjct: 246 RDRIKALTQVQTSQGINPRGVAEADVIGLHLDSGQACVQVFFIRANQNWGNQDFYPRING 305

Query: 303 DCEPAEAIAAFLDQHYREHPIPARILVNVPPADEEAAE-SLAALAERPVPIQEPRQTAHR 361
           D  PAE + AF+ Q Y     P +++++    + +  E +L+  A R V I  P++    
Sbjct: 306 DVSPAEVMEAFIGQFYDNKEPPRQLILSDEIENGDLMEQALSDKAGRRVEILVPQRGEKT 365

Query: 362 MWVEMAVQNARIAIASRRATLSMQGQRLEALQEALGLAELPQRIECFDISHTQGEATVAS 421
             V  AV+NAR ++A R A  + Q + L  + EA GL   PQRIE +D SH QG   V  
Sbjct: 366 ELVAGAVRNARESLARRMAESATQAKLLRGVAEAFGLEGPPQRIEVYDNSHIQGSHAVGG 425

Query: 422 CVVYQGNGMRKSEYRRYNIR--DIQKGDDYAAMRQAVSRRYDKVAVGE-----GVCPDLI 474
            +V    G  K+ YR++NIR  D+  GDD+  M++ ++RR+ ++   +     G+ PDL+
Sbjct: 426 MIVAGPEGFMKNAYRKFNIRGDDLTPGDDFGMMKEVLNRRFSRLLKEDPDREKGLWPDLL 485

Query: 475 LIDGGKGQVGVAYSALEELGLAHVPMIGVAKGVERKVGLEQLIFPDGRKPLQLPSTHPAL 534
           LIDGG GQV      + E G+  +PMIGVAKGV+R  G E+     G     L    P L
Sbjct: 486 LIDGGAGQVSAVAEIMAEHGVQDIPMIGVAKGVDRDHGKEE-FHRLGAPAFALQRNDPVL 544

Query: 535 HLIQEIRDESHRFAVSGHRAQRGKARRTSTLEEIPGVGPTRRKALIAHFGGLQGIAGASV 594
           + +Q +RDE+HRFA+  HRA+R KA   + L+E+PGVG  R++AL+AHFG  + ++ A++
Sbjct: 545 YFVQRMRDEAHRFAIGTHRAKRAKAMGATPLDEVPGVGAARKRALLAHFGSAKAVSRANL 604

Query: 595 DRLAEVPGISRDLAERIYSALH 616
             L  V G+S  LA+RIY   H
Sbjct: 605 SDLKAVEGVSAALAQRIYDFFH 626