Pairwise Alignments

Query, 616 a.a., excinuclease ABC, C subunit from Dechlorosoma suillum PS

Subject, 608 a.a., excinuclease ABC subunit UvrC from Pseudomonas aeruginosa PA14

 Score =  630 bits (1624), Expect = 0.0
 Identities = 321/603 (53%), Positives = 428/603 (70%), Gaps = 6/603 (0%)

Query: 19  FDAKTFLATLTDLPGVYRMLDAEGKVLYVGKAKNLKKRVSSYFQRTVSSPRIALMVSRIC 78
           FDA  FLAT ++ PGVYRM DA+ K+LYVGKAK+LKKR++SYF+++  +P+ A +V+RI 
Sbjct: 5   FDASAFLATCSNRPGVYRMFDADAKLLYVGKAKSLKKRLASYFRKSGLAPKTAALVARIA 64

Query: 79  GIDTTVTRSEAEALLLENNLIKSLDPPFNILFRDDKSYPYVQLT-RDQFPRLAFFRGAPD 137
            ++TT+T +E EALLLE  LIK   PP+NIL RDDKSYP+V L+  D++PRL+  RGA  
Sbjct: 65  QVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPFVFLSSEDEYPRLSLHRGAKK 124

Query: 138 RKADYYGPFPAASVVRDSIHLLQKTFHLRTCEDSVFANRSRPCLLYQIHRCSGPCVGLIS 197
           RK  Y+GP+P+A  +R+S++LLQK F +R CEDS F NR+RPCL YQI RC GPCVGL+S
Sbjct: 125 RKGRYFGPYPSAGAIRESLNLLQKAFLVRQCEDSYFRNRTRPCLQYQIKRCKGPCVGLVS 184

Query: 198 AEDYAKDVQLAAMFLKGKQHEVIQRLTEAMEQASMALAFEQAAVLRDRIQGLRRIQEKQY 257
            E+YA+DV+ + MFL+G+ + +   L   MEQA+M L FE+AA LRD++  LRR+Q++Q 
Sbjct: 185 PEEYAEDVRHSVMFLEGRSNALADELNVGMEQAAMRLDFEKAAELRDQVAILRRVQDQQS 244

Query: 258 VDSGRDEDADVVVAVQESGMLCLNLAMIRGGQHLGDKPLFPKNAADCEPAEAIAAFLDQH 317
           ++ G   D D+V A+   G  C++L  +RGG+ LG K  FP+ A + E  E + AFL Q+
Sbjct: 245 MEGGNG-DVDIVAAIVTPGGACVHLISVRGGRVLGSKNFFPQVAIEEEVGEVLLAFLGQY 303

Query: 318 YREHP---IPARILVNVPPADEEAAESLAALAE-RPVPIQEPRQTAHRMWVEMAVQNARI 373
           Y  H    +PA ++VNV   D     S  A A  R + I    +     W ++AV NA  
Sbjct: 304 YLSHQERDLPAELIVNVTHEDFPVLVSAIAEARGRELEISYRVRGTRARWQQLAVTNAEQ 363

Query: 374 AIASRRATLSMQGQRLEALQEALGLAELPQRIECFDISHTQGEATVASCVVYQGNGMRKS 433
           A+ +R A       R EAL EAL LAE PQR+ECFDISH+ GEATVASCVV+   G  KS
Sbjct: 364 ALGARLANRQHVAARFEALAEALDLAEPPQRLECFDISHSSGEATVASCVVFGPEGPLKS 423

Query: 434 EYRRYNIRDIQKGDDYAAMRQAVSRRYDKVAVGEGVCPDLILIDGGKGQVGVAYSALEEL 493
           +YRRYNI  +  GDDYAAM QA++RR+ ++  GEG  PD++L+DGGKGQ+ +A   L+EL
Sbjct: 424 DYRRYNIEGVTAGDDYAAMHQALTRRFSRLKDGEGKMPDILLVDGGKGQLAMAQEVLQEL 483

Query: 494 GLAHVPMIGVAKGVERKVGLEQLIFPDGRKPLQLPSTHPALHLIQEIRDESHRFAVSGHR 553
            +A + ++GVAKGV RK GLE L   D      LP+  PALHLIQ+IRDE+HRFA++GHR
Sbjct: 484 AVAGLILLGVAKGVTRKPGLETLYLNDASHEFTLPADSPALHLIQQIRDEAHRFAITGHR 543

Query: 554 AQRGKARRTSTLEEIPGVGPTRRKALIAHFGGLQGIAGASVDRLAEVPGISRDLAERIYS 613
           A+RGKARRTSTLE++PGVGP RR+ L+ HFGGLQ ++ AS+D LA+ PGIS+ LAE+IY+
Sbjct: 544 ARRGKARRTSTLEDVPGVGPKRRRDLLKHFGGLQELSRASIDELAKAPGISKKLAEQIYA 603

Query: 614 ALH 616
            LH
Sbjct: 604 VLH 606