Pairwise Alignments

Query, 616 a.a., excinuclease ABC, C subunit from Dechlorosoma suillum PS

Subject, 610 a.a., excinuclease ABC subunit UvrC from Pantoea sp. MT58

 Score =  553 bits (1424), Expect = e-161
 Identities = 304/607 (50%), Positives = 399/607 (65%), Gaps = 13/607 (2%)

Query: 19  FDAKTFLATLTDLPGVYRMLDAEGKVLYVGKAKNLKKRVSSYFQRTVSSPRIALMVSRIC 78
           FD+K FL+T+T  PGVYRM DA G V+YVGKAK+LKKR++SYF+  V S +   +VS I 
Sbjct: 5   FDSKAFLSTVTSKPGVYRMYDASGTVIYVGKAKDLKKRLTSYFRVQVGSRKTEALVSNIQ 64

Query: 79  GIDTTVTRSEAEALLLENNLIKSLDPPFNILFRDDKSYPYVQLTRDQFPRLAFFRGAPDR 138
            ID TVT +E EALLLE+N IK   P +N+L RDDKSYPY+ L+ D  PRLA  RGA   
Sbjct: 65  HIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPYIFLSSDTHPRLAMHRGAKHA 124

Query: 139 KADYYGPFPAASVVRDSIHLLQKTFHLRTCEDSVFANRSRPCLLYQIHRCSGPCV-GLIS 197
           K +Y+GPFP    VR+++ LLQK F +R CE+SV+ NRSRPCL YQI RC GPCV GL+S
Sbjct: 125 KGEYFGPFPNGYAVRETLGLLQKVFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVAGLVS 184

Query: 198 AEDYAKDVQLAAMFLKGKQHEVIQRLTEAMEQASMALAFEQAAVLRDRIQGLRRIQEKQY 257
            E+YA+      +FL GK  +V+ +L + ME+AS+ L FE+AA LRD+IQ +RRI EKQ+
Sbjct: 185 EEEYAQQTDYVRLFLAGKDDQVLNQLVKHMEEASIGLRFEEAARLRDQIQAVRRITEKQF 244

Query: 258 VDSGRDEDADVVVAVQESGMLCLNLAMIRGGQHLGDKPLFPKNAADCEPAEAIAAFLDQH 317
           V S + +D DV+    E+GM CL++  IR G+ LG +  FPK   D + AE +  F+ Q 
Sbjct: 245 V-SNQGDDLDVMGVAYEAGMACLHVLFIRQGKVLGSRSYFPKVPVDTDLAEVVQTFVGQF 303

Query: 318 YRE----HPIPARILVNVP-PADEEAAESLAALAERPVPIQEPRQTAHRMWVEMAVQNAR 372
           Y +      +P  IL++   P  E  AESL+ LA R V IQ   +     ++++A  NA 
Sbjct: 304 YLQGSEARTLPGDILLDFTLPERELLAESLSELAGRRVNIQSKPRGDRARYLKLARTNAA 363

Query: 373 IAIASRRATLSMQGQRLEALQEALGLAELPQRIECFDISHTQGEATVASCVVYQGNGMRK 432
            A+ +R +  S   QRL AL E L L ++  R+ECFDISHT GE T+ASCVV+  NG  +
Sbjct: 364 TALTTRLSQHSTIHQRLNALAEFLELDKI-TRMECFDISHTMGEQTIASCVVFDQNGPLR 422

Query: 433 SEYRRYNIRDIQKGDDYAAMRQAVSRRYDKVAVGEGVCPDLILIDGGKGQVGVAYSALEE 492
           ++YRRYNI  I  GDDYAAM Q + RRY K A+ E   PD+ILIDGGKGQ+  A     E
Sbjct: 423 ADYRRYNITGITPGDDYAAMNQVLRRRYGK-AIEEDKIPDVILIDGGKGQLSQAIQVFAE 481

Query: 493 LGLA----HVPMIGVAKGVERKVGLEQLIFPDGRKPLQLPSTHPALHLIQEIRDESHRFA 548
           L +        ++GVAKG +RK GLE L F    + + +P   PALH+IQ IRD++H  A
Sbjct: 482 LDVPWDKNQPILLGVAKGSDRKAGLETLFFEAEGEGVSMPPDAPALHVIQHIRDDAHNHA 541

Query: 549 VSGHRAQRGKARRTSTLEEIPGVGPTRRKALIAHFGGLQGIAGASVDRLAEVPGISRDLA 608
           +SGHR +R K + TS LE I GVGP RR+ L+ + GGLQ +  ASV+ +A VPGIS  LA
Sbjct: 542 ISGHRKKRAKVKNTSALESIEGVGPKRRQQLLKYMGGLQPLMNASVEEIANVPGISHALA 601

Query: 609 ERIYSAL 615
           E+IY +L
Sbjct: 602 EKIYYSL 608