Pairwise Alignments

Query, 331 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

 Score =  266 bits (680), Expect = 5e-76
 Identities = 141/310 (45%), Positives = 196/310 (63%), Gaps = 8/310 (2%)

Query: 14  IGEDEQGQRLDNYLLRVCKGVPKSHIYRILRSGEVRVNSKRADAAYRIQAGDILRIPPIR 73
           I ED  GQR+DN+L    K +PKS +YRILR GEVRVN KR  A Y+++AGD++R+PP+ 
Sbjct: 13  IDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVRVPPVT 72

Query: 74  VAARPDEVAAAEVA-GQAVKADLPLLYEDDALLAVNKPAGIAVHGGSGVSFGVIEALRHQ 132
           V  + +E A       +  + +  ++YEDD LL +NKP+G AVHGGSG+ FG IEALR  
Sbjct: 73  VEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRAL 132

Query: 133 RPQAKLLELAHRLDRETSGILLVAKKRSALTALHDMFREGGAGRGADKRYLVAVQGRWMD 192
           RPQA+ LEL HR+DR+TSGILLVAKKRSAL  L   FRE    +   K Y   V G W  
Sbjct: 133 RPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFRE----KTVQKYYYALVMGHWD- 187

Query: 193 PLRHCRQALHKYLLDNGERRVRVDPEGKPSHTVFRLVARWQRFSLLEAELKSGRTHQIRV 252
               C+      L +     VRV+P GKPS T FR++ ++   +L++A   +GRTHQIRV
Sbjct: 188 --AECKVVNAPLLKNEVNSIVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIRV 245

Query: 253 HLAHLGYPILGDDKYGDFALNRELQREGLKRMFLHAWRMRFPHPLTKEAMSLEAPLPPAL 312
           H  ++G+PI  DD+YGD   +    + G++R+FLHA  ++F HP +++ + + APL   L
Sbjct: 246 HTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLEAHL 305

Query: 313 ASFLHHLSES 322
              L  + ++
Sbjct: 306 EQALTKMRQA 315