Pairwise Alignments

Query, 331 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (303), Expect = 3e-32
 Identities = 94/324 (29%), Positives = 151/324 (46%), Gaps = 34/324 (10%)

Query: 13  TIGEDEQGQRLDNYLLRVCKGVPKSHIYRILRSGEVRVNSKRADAAYRIQAGDILRIPPI 72
           T+ + + GQRLD  +  +     +S +   L  G++ VN            GD++  P  
Sbjct: 10  TVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVN------------GDVITKPRT 57

Query: 73  RVAARPDEVAAAEVAGQA--VKADLPL--LYEDDALLAVNKPAGIAVHGGSGVSFGVI-- 126
           +V         AE+  +      DLPL  +YEDD ++ +NKP    VH G+G +   +  
Sbjct: 58  KVMGGEVITVQAELEDEQRWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLN 117

Query: 127 EALRHQRPQAKLLE--LAHRLDRETSGILLVAKKRSALTALHDMFREGGAGRGADKRYLV 184
             L H  P A++    + HRLD++T+G+++VAK   A T L    ++    R  +   + 
Sbjct: 118 ALLFHYSPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIG 177

Query: 185 AVQGRWMDPLRHCRQALHKYLLDNGERRVRVDPEGKPSHTVFRLVARWQRFSLLEAELKS 244
            +    M      R +  + L+        V P GK + T +R+   ++  + L   L++
Sbjct: 178 TMTAGGMIDKPIGRHSTKRTLMS-------VSPMGKHAVTHYRVAEHFREHTRLRLRLET 230

Query: 245 GRTHQIRVHLAHLGYPILGDDKYGDFALNRELQREGLKRMF-------LHAWRMRFPHPL 297
           GRTHQIRVH+A+L +P+LGD  YG  A   +   E L  M        LHA  ++F HP+
Sbjct: 231 GRTHQIRVHMAYLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPV 290

Query: 298 TKEAMSLEAPLPPALASFLHHLSE 321
           T E +   AP+P  +      L E
Sbjct: 291 TGEELEFHAPVPDDMVEMTLALRE 314