Pairwise Alignments

Query, 331 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 323 a.a., RluA family pseudouridine synthase (RefSeq) from Shewanella loihica PV-4

 Score =  134 bits (338), Expect = 2e-36
 Identities = 100/330 (30%), Positives = 160/330 (48%), Gaps = 42/330 (12%)

Query: 11  RATIGEDEQGQRLDNYLLRVCKGVPKSHIYRILRSGEVRVNSK-RADAAYRIQAGDILRI 69
           ++ I   + GQRLD  L  +     ++ I   +++G V V+   +     ++  G  + I
Sbjct: 8   KSEITATQTGQRLDQTLAELFPDYSRTRIKEWIQAGAVYVDGMVQTKPREKVLEGQEIEI 67

Query: 70  PPIRVAARPDEVAAAEVAGQAVKADLPLLYEDDALLAVNKPAGIAVHGGSGVSFGVI-EA 128
                    +     E+  +A   DL ++YEDD ++ +NK AG+ VH G+G S G +  A
Sbjct: 68  ---------EATLKEEIKAEAQAIDLDIVYEDDHIIVINKQAGLVVHPGAGNSDGTLMNA 118

Query: 129 LRHQRPQAKLLELA---HRLDRETSGILLVAKKRSALTALHDMFREGGAGRGADKRYLVA 185
           L H  P+ +L+  A   HRLD++T+G+++VAK   A T L    +     R   + Y   
Sbjct: 119 LLHHCPEIELVPRAGIVHRLDKDTTGLMVVAKTVEAQTHLVAALQ----AREITREYEAI 174

Query: 186 VQGRWM------DPL-RHCRQALHKYLLDNGERRVRVDPEGKPSHTVFRLVARWQRFSLL 238
           V G         +P+ RH  +  H          + V   G+PS T +R+  +++  + L
Sbjct: 175 VSGTMTAGGVVDEPIARHPTKRTH----------MAVHHSGRPSVTHYRVAEKFRAHTRL 224

Query: 239 EAELKSGRTHQIRVHLAHLGYPILGDDKYG-----DFALNRELQR--EGLKRMFLHAWRM 291
              L++GRTHQIRVH+AH+G+ ++GD  YG           EL     G KR  LHA R+
Sbjct: 225 RLRLETGRTHQIRVHMAHIGHILVGDPVYGGRPRPPKKATPELMEALNGFKRQALHAVRL 284

Query: 292 RFPHPLTKEAMSLEAPLPPALASFLHHLSE 321
              HP T E MS +AP+P  + +    L +
Sbjct: 285 ELAHPFTCEIMSWQAPIPEDMVALTRALRD 314