Pairwise Alignments

Query, 331 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 323 a.a., ribosomal large subunit pseudouridine synthase D (RefSeq) from Shewanella sp. ANA-3

 Score =  120 bits (301), Expect = 5e-32
 Identities = 100/317 (31%), Positives = 158/317 (49%), Gaps = 40/317 (12%)

Query: 11  RATIGEDEQGQRLDNYLLRVCKGVPKSHIYRILRSGEVRVN----SKRADAAYRIQAGDI 66
           ++ I   + G RLD  L  +     ++ I   + S  V V+    +K  +  + +Q  +I
Sbjct: 8   KSEISATQTGLRLDQALAELFPDYSRTRIKEWILSDAVYVDGVIVNKPREKVFELQRIEI 67

Query: 67  LRIPPIRVAARPDEVAAAEVAGQAVKADLPLLYEDDALLAVNKPAGIAVHGGSGVSFGVI 126
                   A   +EV AA    QA++ D+  +YEDD +L +NK AG+ VH G+G + G +
Sbjct: 68  N-------ATLEEEVHAA---AQAIELDI--VYEDDDILVINKQAGLVVHPGAGNADGTL 115

Query: 127 -EALRHQRPQAKLLELA---HRLDRETSGILLVAKKRSALTALHDMFREGGAGRGADKRY 182
             AL H  P  + +  A   HRLD++T+G+++VAK   A T L    +     R  +   
Sbjct: 116 MNALLHHCPNIEHVPRAGIVHRLDKDTTGLMVVAKTVEAQTHLVAALQAREITREYEAIV 175

Query: 183 L--VAVQGRWMDPL-RHCRQALHKYLLDNGERRVRVDPEGKPSHTVFRLVARWQRFSLLE 239
           L  +   G   +P+ RH  +  H          + V   GKP+ T +R+  +++  + L 
Sbjct: 176 LGTMTAGGTVDEPIGRHPTKRTH----------MAVHHSGKPAVTHYRVAEKFRNHTRLR 225

Query: 240 AELKSGRTHQIRVHLAHLGYPILGDDKYG-----DFALNRELQR--EGLKRMFLHAWRMR 292
             L+SGRTHQIRVH+A++G+ ++GD  YG       A + E     +  KR  LHA R+ 
Sbjct: 226 LRLESGRTHQIRVHMAYIGHVLVGDPVYGGRPKPPKAASPEFFEILKNFKRQALHAVRLE 285

Query: 293 FPHPLTKEAMSLEAPLP 309
             HP+T E MS  AP+P
Sbjct: 286 LAHPVTCEIMSWTAPIP 302