Pairwise Alignments

Query, 331 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 329 a.a., ribosomal large subunit pseudouridine synthase C (RefSeq) from Shewanella sp. ANA-3

 Score =  292 bits (747), Expect = 9e-84
 Identities = 153/310 (49%), Positives = 205/310 (66%), Gaps = 4/310 (1%)

Query: 13  TIGEDEQGQRLDNYLLRVCKGVPKSHIYRILRSGEVRVNSKRADAAYRIQAGDILRIPPI 72
           TI ED   QR+DN+L+ V KGVPKS IYRI+R GEVRVN KR    Y++Q GD++R+PP+
Sbjct: 24  TIDEDHLDQRIDNFLITVLKGVPKSMIYRIVRKGEVRVNKKRIKPEYKLQIGDVVRVPPV 83

Query: 73  RVAARPDEVAAAEVAGQAVKADLPLLYEDDALLAVNKPAGIAVHGGSGVSFGVIEALRHQ 132
           R+A + +  A +    +  + +  +L+ED+ L+ +NKPAGIAVHGGSGV +GVIEALR  
Sbjct: 84  RMAEQDNRTAPSANLSRVSQLEDRILHEDNHLIVLNKPAGIAVHGGSGVDYGVIEALRSL 143

Query: 133 RPQAKLLELAHRLDRETSGILLVAKKRSALTALHDMFREGGAGRGADKRYLVAVQGRWMD 192
           RPQ K LEL HRLD++TSG+LLVAKKRSAL  +HD  R     +   K YL  V+G W  
Sbjct: 144 RPQQKFLELVHRLDKDTSGVLLVAKKRSALKHMHDQLRY----KKMQKDYLALVKGEWSA 199

Query: 193 PLRHCRQALHKYLLDNGERRVRVDPEGKPSHTVFRLVARWQRFSLLEAELKSGRTHQIRV 252
             +  +Q L K  L +GER VRV+ EGKPS T F++V R+Q  +L++A   +GRTHQIRV
Sbjct: 200 QDKVVKQPLLKLTLKSGERIVRVNAEGKPSETRFKIVQRYQGCTLVQASPVTGRTHQIRV 259

Query: 253 HLAHLGYPILGDDKYGDFALNRELQREGLKRMFLHAWRMRFPHPLTKEAMSLEAPLPPAL 312
           H  ++G+PI  D+KY + A +  ++  GL R+FLHA  + F HP   E M + APL   L
Sbjct: 260 HCQYMGHPIACDEKYSEQAFDDSMRALGLTRLFLHAAELMFIHPENDEVMRVSAPLDDNL 319

Query: 313 ASFLHHLSES 322
              L  L  +
Sbjct: 320 QQLLSKLKRA 329