Pairwise Alignments

Query, 690 a.a., excinuclease ABC, B subunit from Dechlorosoma suillum PS

Subject, 712 a.a., excinuclease ABC subunit B from Azospirillum brasilense Sp245

 Score =  776 bits (2004), Expect = 0.0
 Identities = 398/668 (59%), Positives = 498/668 (74%), Gaps = 11/668 (1%)

Query: 18  GSPYRLHQPFPPAGDQPEAIRLLVEGLEDGLSYQTLLGVTGSGKTYTMANVIARTGRPAL 77
           G  + L   F P+GDQP AI  L EGL  G   Q LLGVTGSGKT+TMA+VI    RP L
Sbjct: 20  GKKFELVSEFKPSGDQPRAIGELTEGLRAGEKDQVLLGVTGSGKTFTMAHVIQHVQRPTL 79

Query: 78  ILAPNKTLAAQLYAEFREFLPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSINDHIEQ 137
           +LAPNKTLAAQLY E + F P NAVEYFVSYYDYYQPEAYVP  D FIEK+SSIN+ I++
Sbjct: 80  VLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPRTDTFIEKESSINEQIDR 139

Query: 138 MRLSATKSLLERRDVVIVATVSCIYGIGDKDDYHNMILHLRQGDKAGQRDIIKRLSEMQY 197
           MR SAT++LLER DV+IVA+VSCIYGIG  + Y  M + LR+G    Q D++++L+E+QY
Sbjct: 140 MRHSATRALLERDDVIIVASVSCIYGIGSVETYSEMTVDLRRGQVVAQPDLLRKLTELQY 199

Query: 198 ERNEVDFQRGTFRVRGDVIDIFPAEHAEHAIRVCLFDDEIETLQLFDPLTGHLLHKLPRF 257
           +RN+  F RG FRVRGD +++FPA   + A R+ LF DEIE +   DPLTG  +  L   
Sbjct: 200 KRNDAAFGRGLFRVRGDTVELFPAHMEDRAWRISLFGDEIEGIHEIDPLTGEKIASLEAV 259

Query: 258 TIYPSSHYVTPRATVLRAVEGIKEELRKRLEFFHKEQRLVEAQRIEQRTRFDLEMLNELG 317
            IYP+SHYVTP+ T+ +A+E IK EL+ RLE F+ + +L+EAQR+EQRT FD+EM+   G
Sbjct: 260 RIYPNSHYVTPKPTLNQAIEQIKRELKLRLEEFNAQGKLLEAQRLEQRTTFDIEMMAATG 319

Query: 318 FCKGIENYSRHLSGRKPGEAPPTLLDYLPPDALMFIDESHVAIGQVGAMYKGDRSRKENL 377
            C GIENYSR+L+GR  GE PPTL +YLP DAL+ +DESHV + Q+G MY+GDR RKE L
Sbjct: 320 ACAGIENYSRYLTGRAAGEPPPTLFEYLPGDALLIVDESHVMVPQIGGMYRGDRMRKETL 379

Query: 378 VDYGFRLPSALDNRPLKFEEFERLMRQTIFVSATPSDYEKQHQGQV-VEQVVRPTGLIDP 436
            +YGFRLPSA+DNRPLKFEE+E +  QT+FVSATP  +E +  G V  EQVVRPTGLIDP
Sbjct: 380 SEYGFRLPSAMDNRPLKFEEWEGMRPQTVFVSATPGPWEMERTGGVFAEQVVRPTGLIDP 439

Query: 437 VVLVRPAMTQVDDLLSEIRKRIAVSERVLVTTLTKRMAEDLTDYLRENGIKVRYVHSDID 496
            V++RP  TQVDDL+ E ++ +A   RVLVTTLTK+MAE LT+Y+ E G++VRY+HSD++
Sbjct: 440 EVIIRPTETQVDDLIHECKEVVAKGNRVLVTTLTKKMAEALTEYMHEAGLRVRYIHSDVE 499

Query: 497 TVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR 556
           T+ER+EIIRDLRLG +DVLVGINLLREGLDIPE SLVAILDADKEG+LRS+ SLIQTIGR
Sbjct: 500 TLERIEIIRDLRLGAYDVLVGINLLREGLDIPECSLVAILDADKEGYLRSKTSLIQTIGR 559

Query: 557 AARHLNGTAILYADRVTDSMRRAMDETERRRAKQMAHNEAHGITPKGVSKRIKDIIDGVY 616
           AAR++ G AILYAD++T SM+ A+DET RRR KQ A+N  HGITP+ V K I DI++ VY
Sbjct: 560 AARNVEGRAILYADKITGSMQYAIDETARRREKQRAYNLEHGITPESVKKAIGDILESVY 619

Query: 617 ---DPDAAQKELKAAQQQAVYETMSEKNLAKEIKRLEKQMLESAKNLEFEKAAAARDELF 673
              D    +  L A++       +   NL   +  +EK+M  +A +LEFE+AA  RDEL 
Sbjct: 620 ERGDHVTVKTGLNASE-------LVGHNLKSVMADMEKRMKAAAADLEFEEAARLRDELR 672

Query: 674 RLKQQAFG 681
           RL+    G
Sbjct: 673 RLEAMDLG 680