Pairwise Alignments

Query, 690 a.a., excinuclease ABC, B subunit from Dechlorosoma suillum PS

Subject, 673 a.a., Excinuclease ABC subunit B from Xanthomonas campestris pv. campestris strain 8004

 Score =  848 bits (2190), Expect = 0.0
 Identities = 429/665 (64%), Positives = 529/665 (79%), Gaps = 10/665 (1%)

Query: 21  YRLHQPFPPAGDQPEAIRLLVEGLEDGLSYQTLLGVTGSGKTYTMANVIARTGRPALILA 80
           + L  P+ PAGDQP AI  LV   E GL+ QTLLGVTGSGKTYT+ANV+ +  +P L++A
Sbjct: 5   FELVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPTLVMA 64

Query: 81  PNKTLAAQLYAEFREFLPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSINDHIEQMRL 140
           PNKTLAAQLY EF+ F P NAVEYFVSYYDYYQPEAYVPS D FIEKDSSIN+HIEQMRL
Sbjct: 65  PNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIEQMRL 124

Query: 141 SATKSLLERRDVVIVATVSCIYGIGDKDDYHNMILHLRQGDKAGQRDIIKRLSEMQYERN 200
           SATK+LL RRD ++VATVS IYG+G  +DY ++ L L  G+   QR +I+ L+++QY RN
Sbjct: 125 SATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSIGEHIDQRQLIRHLTDLQYTRN 184

Query: 201 EVDFQRGTFRVRGDVIDIFPAEHAEHAIRVCLFDDEIETLQLFDPLTGHLLHKLPRFTIY 260
           E +  RG FRVRG+V+D+FPAE    A+R+ LFD +IE L LFDPLTG  L KL R+T+Y
Sbjct: 185 EFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQRYTVY 244

Query: 261 PSSHYVTPRATVLRAVEGIKEELRKRLEFFHKEQRLVEAQRIEQRTRFDLEMLNELGFCK 320
           P +HY T R   L AV+ IKEEL++RLE  + + +LVEAQR+ QRT+FDLEM+ E+GFC 
Sbjct: 245 PKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEVGFCN 304

Query: 321 GIENYSRHLSGRKPGEAPPTLLDYLPPDALMFIDESHVAIGQVGAMYKGDRSRKENLVDY 380
           GIENYSRHL+G+ PGE PPTL DYLPPDAL+ IDESHV I Q+GAMYKGDRSRKE LV++
Sbjct: 305 GIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKETLVEF 364

Query: 381 GFRLPSALDNRPLKFEEFERLMRQTIFVSATPSDYE-KQHQGQVVEQVVRPTGLIDPVVL 439
           GFRLPSALDNRPL+FEE+E    ++I+VSATP  YE ++  G++ E VVRPTGLIDPVV 
Sbjct: 365 GFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEITELVVRPTGLIDPVVE 424

Query: 440 VRPAMTQVDDLLSEIRKRIAVSERVLVTTLTKRMAEDLTDYLRENGIKVRYVHSDIDTVE 499
           +RP  TQVDDL+SE+ +RI + +RVLVTTLTKRMAE+LT+YL E+GI+VRY+HSDIDTVE
Sbjct: 425 IRPVGTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDIDTVE 484

Query: 500 RVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 559
           RVEIIRDLRLG+FDVLVGINLLREGLD+PEVSLVAILDADKEGFLRS  SLIQTIGRAAR
Sbjct: 485 RVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIGRAAR 544

Query: 560 HLNGTAILYADRVTDSMRRAMDETERRRAKQMAHNEAHGITPKGVSKRIKDIIDGVYDPD 619
           +L G AILYAD++T SM+ A+DET+RRR KQ+ +N  HGITPK V++ I DI++G  + D
Sbjct: 545 NLRGKAILYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVARPISDIMEGARE-D 603

Query: 620 AAQKEL--------KAAQQQAVYETMSEKNLAKEIKRLEKQMLESAKNLEFEKAAAARDE 671
           AA+K+         + A++ A Y  M    +A ++K LE++M + AK+LEFE AA  RD+
Sbjct: 604 AAEKKAGKGRSKSRQVAEEPADYRAMGPAEIAGKLKALEQKMYQHAKDLEFEAAAQIRDQ 663

Query: 672 LFRLK 676
           + +LK
Sbjct: 664 ILKLK 668