Pairwise Alignments

Query, 690 a.a., excinuclease ABC, B subunit from Dechlorosoma suillum PS

Subject, 687 a.a., excinuclease ABC subunit UvrB from Castellaniella sp019104865 MT123

 Score =  969 bits (2506), Expect = 0.0
 Identities = 492/666 (73%), Positives = 561/666 (84%), Gaps = 3/666 (0%)

Query: 14  VTFPGSPYRLHQPFPPAGDQPEAIRLLVEGLEDGLSYQTLLGVTGSGKTYTMANVIARTG 73
           V FPGSP++L QP+PPAGDQP AI+ L  G+ DGL  QTLLGVTGSGKTYTMAN+IARTG
Sbjct: 22  VRFPGSPFQLFQPYPPAGDQPAAIQALEAGVRDGLMCQTLLGVTGSGKTYTMANLIARTG 81

Query: 74  RPALILAPNKTLAAQLYAEFREFLPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSIND 133
           RPA++LAPNKTLAAQLY+E REF P NAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSIN+
Sbjct: 82  RPAIVLAPNKTLAAQLYSEMREFFPRNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSINE 141

Query: 134 HIEQMRLSATKSLLERRDVVIVATVSCIYGIGDKDDYHNMILHLRQGDKAGQRDIIKRLS 193
           HIEQMRLSATKSLLER+D +IV TVSCIYGIG+  DYH M+L LR GD+ G+++I+ RL 
Sbjct: 142 HIEQMRLSATKSLLERQDTIIVGTVSCIYGIGNPADYHAMVLTLRTGDRVGRQEILARLV 201

Query: 194 EMQYERNEVDFQRGTFRVRGDVIDIFPAEHAEHAIRVCLFDDEIETLQLFDPLTGHLLHK 253
            MQYERN++DF RGTFR RG++ID+FPAEHAE A+R+ LFDDEIE+L LFDPLTG L+  
Sbjct: 202 SMQYERNDMDFARGTFRARGEIIDVFPAEHAEQALRITLFDDEIESLDLFDPLTGKLVQN 261

Query: 254 LPRFTIYPSSHYVTPRATVLRAVEGIKEELRKRLEFFHKEQRLVEAQRIEQRTRFDLEML 313
           L RFTI+PSSHYVTPR TVL A++ IK+ELR RL     + +LVEAQR+EQRTRFDLEML
Sbjct: 262 LVRFTIFPSSHYVTPRETVLHAIQTIKDELRDRLAELTADGKLVEAQRLEQRTRFDLEML 321

Query: 314 NELGFCKGIENYSRHLSGRKPGEAPPTLLDYLPPDALMFIDESHVAIGQVGAMYKGDRSR 373
            ELGFCKGIENYSRHLSG  PG+ PPTL+DYLP +A+MFIDESHV IGQ+G MY+GDRSR
Sbjct: 322 QELGFCKGIENYSRHLSGAAPGDPPPTLIDYLPANAMMFIDESHVTIGQLGGMYRGDRSR 381

Query: 374 KENLVDYGFRLPSALDNRPLKFEEFERLMRQTIFVSATPSDYEKQHQGQVVEQVVRPTGL 433
           KE LV +GFRLPSALDNRPL+ EEFE  M Q +FVSATP  YE  H  ++VEQVVRPTGL
Sbjct: 382 KETLVQFGFRLPSALDNRPLRLEEFEARMPQCVFVSATPGPYEAAHADEIVEQVVRPTGL 441

Query: 434 IDPVVLVRPAMTQVDDLLSEIRKRIAVSERVLVTTLTKRMAEDLTDYLRENGIKVRYVHS 493
           +DP V +RPA TQVDDLL E + RIA  ERVLVTTLTKRMAEDLT+YL+ENG+KVRY+HS
Sbjct: 442 VDPEVELRPAATQVDDLLGEAKLRIAHHERVLVTTLTKRMAEDLTEYLQENGLKVRYLHS 501

Query: 494 DIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQT 553
           DIDTVERVEIIRDLRLG FDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQT
Sbjct: 502 DIDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQT 561

Query: 554 IGRAARHLNGTAILYADRVTDSMRRAMDETERRRAKQMAHNEAHGITPKGVSKRIKDIID 613
           IGRAAR+LNG AILYADRVTDSMRRAMDET RRR KQ A N  HGI  +GVSK ++D+ID
Sbjct: 562 IGRAARNLNGRAILYADRVTDSMRRAMDETARRREKQQAFNLEHGIVARGVSKAVRDLID 621

Query: 614 GVYDPDAAQKELKAAQQQAVYETMSEKNLAKEIKRLEKQMLESAKNLEFEKAAAARDELF 673
           GV    A+    +A   ++V     EK LA+EIKRLE++M E A+NLEFE+AAA RD L 
Sbjct: 622 GV-SVAASPVTAEAGFDESVLS--DEKALAREIKRLEQRMNEHARNLEFEQAAAVRDTLR 678

Query: 674 RLKQQA 679
            L+ +A
Sbjct: 679 TLRDRA 684