Pairwise Alignments

Query, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 946 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  375 bits (963), Expect = e-108
 Identities = 233/549 (42%), Positives = 323/549 (58%), Gaps = 17/549 (3%)

Query: 87  EGAHDGMWTWNPLSKELTAGQRLHAILGYGENFLMDTHAWLTLVHPEDTARYNRAVSEHL 146
           E A +G+  ++P    L A Q    + G+  + ++  +  + L    D  R+   + + L
Sbjct: 398 EAASEGIVIFDPHYVLLAANQAFTRVTGFNIDDMLGRNV-VDLPCSRDARRHYPVIRQAL 456

Query: 147 KGLTPHFYCEYRVRAKSGEY-RWIASRGIAVRDARGVATLMAGSVTDITERKLHEERMRY 205
           K            RA    Y +W+      VR+ARG  + + G   D++ R+  EERMRY
Sbjct: 457 KQHGTWQGELVEARANGELYPQWLQLN--VVRNARGNVSHIVGFFADLSARRESEERMRY 514

Query: 206 LAHHDQLTGLPNRLLLADRLPQALTRAKRQQSRA-AVLFVDLDRFKNINDSLGHNQGDRL 264
           L H+D+LTGL NR L  +RL +A  R ++   R+ A+L ++LDRFK +NDSLGH+  D+L
Sbjct: 515 LTHYDELTGLANRSLFRERLHEAHQRVRQGGRRSLALLHINLDRFKLLNDSLGHDIADQL 574

Query: 265 LQSVARRLQECLRQSDTIVRQGGDEFIVILEDLQLPEQAGQIGAKLLETLASPYREDGYD 324
           LQ +ARRL   L ++DTI R  GDEF V+ +         ++  +L   L  P   +G++
Sbjct: 575 LQKMARRLINALPEADTIARLSGDEFAVLFDAYGNLSSLARVATRLAAKLRVPLTIEGHE 634

Query: 325 FFLTASIGIALYPDDGDDADTLLRNADTAMYEGKSSGGNTVRFYTGRMNERLQSRVSLEN 384
             L+ASIGI+L PD+  +   L+  A+ AM   K  GGN  +FYT  +      R+ LEN
Sbjct: 635 LVLSASIGISLLPDNTREVAMLVSQANMAMQHAKHLGGNNFQFYTDSLQASTLERLQLEN 694

Query: 385 GLRRALERDELQLYYQPQIDLASGRLLGAEALLRWNDG--GRLIPPDQFIPVAEETGLIV 442
            LR+ALE  +L+++YQP++ LA+GRL  AEAL+RW+    GR +PP  FI +AEETGLI 
Sbjct: 695 QLRKALEEQQLKVFYQPKLCLATGRLNAAEALVRWDHPAMGR-VPPGDFIGLAEETGLIG 753

Query: 443 PIGLWVLDTAIARAAAWRRHWQLRQGMGATPPRIAINLSARQFWGGGIAEHVLLRLEREG 502
           PIG +VL  A  +A  W+R        G  P R+++NLS  Q   G +   V   LE  G
Sbjct: 754 PIGEFVLRQACWQACEWQR-------QGLAPIRVSVNLSVHQLRQGKLVSLVRQVLEETG 806

Query: 503 LPPSTIELEVTESVLLRQEADCLEELRRLREAGVGLALDDFGTGYSSLSYLRLLPIDTLK 562
           L P  +ELE+TES LL      +   ++LR+ GV LA+DDFGTGYSSLSYL+ +P+D +K
Sbjct: 807 LAPQYLELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIPVDYVK 866

Query: 563 IDKSFIFPLDEDQDGEAAAIVRAILAMAHTLGHKVVAEGVERQTQLELLRTMGCDSFQGY 622
           ID++FI  L E      AAI RAI+AMAH L  KVVAEGVERQ QLE LR+  CD  QGY
Sbjct: 867 IDQAFIRGLGE--GSVDAAITRAIIAMAHGLSLKVVAEGVERQEQLEFLRSERCDEVQGY 924

Query: 623 LESRPLPPE 631
           L SRP+  E
Sbjct: 925 LVSRPVEAE 933



 Score = 68.9 bits (167), Expect = 1e-15
 Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 26/213 (12%)

Query: 75  LRRAARAYELAMEGAHDGMWTWNPLSKELTAGQRLHAILGYGENFLMDTHAWLT-LVHPE 133
           L ++     LA++ +  G+W WN  + E+   Q L  + G    ++      LT  +HP+
Sbjct: 261 LSKSEARLALALKASELGLWDWNLQTDEVHHTQ-LKELFGLEPEYITAMLTHLTPRLHPQ 319

Query: 134 DTARYNRAVSEHLKGLTPHFYCEYRVRAKSGEYRWIASRGIAV-RDARGVATLMAGSVTD 192
           D     RA+ EHLKG +  +  EYRVR   G + WI  RG AV R   G    M G+  D
Sbjct: 320 DLPALKRALVEHLKGRSEDYQIEYRVRHGDGHWVWIEDRGRAVERSVSGRVLRMVGTRRD 379

Query: 193 I-TERKLHEERMRYLAHHDQLT-GL----PNRLLLADRLPQALTRAKRQQSRAAVLFVDL 246
           I T ++L ++R       +  + G+    P+ +LLA    QA TR               
Sbjct: 380 ISTSKELEQQRQLAATVFEAASEGIVIFDPHYVLLAAN--QAFTRVTG------------ 425

Query: 247 DRFKNINDSLGHNQGDRLLQSVARRLQECLRQS 279
               NI+D LG N  D      ARR    +RQ+
Sbjct: 426 ---FNIDDMLGRNVVDLPCSRDARRHYPVIRQA 455