Pairwise Alignments

Query, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 950 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  389 bits (998), Expect = e-112
 Identities = 235/575 (40%), Positives = 330/575 (57%), Gaps = 25/575 (4%)

Query: 70  REIVILRRAARAYELA---MEGAHDGMWTWNPLSKELTAGQRLHAILGYGENFLMDTHAW 126
           R+I  +RR A    LA    E A +GM   +   + L       A+ GY    L+     
Sbjct: 389 RDISDVRRQAEQQRLAATVFEAASEGMVIMDATYRVLAVNDACCALSGYEREELLGRSIA 448

Query: 127 LTLVHPEDTARYNR---AVSEHLKGLTPHFYCEYRVRAKSGEY--RWIASRGIAVRDARG 181
                PE   +Y     A+  H      H+  E   + KSGE   +W+  R   VRD+  
Sbjct: 449 RIAGTPESQRQYEAMRDALERH-----GHWQGELIEKRKSGEVYPQWVQLR--EVRDSDD 501

Query: 182 VATLMAGSVTDITERKLHEERMRYLAHHDQLTGLPNRLLLADRLPQALTRAKRQQSRAAV 241
             T +   ++D++ R+  EER+RYL H+D LTGL NR L  +RL +A  R +R     AV
Sbjct: 502 SVTHVVAFISDLSVRRKIEERLRYLTHYDDLTGLANRGLFKERLHEACQRVRRNGRNMAV 561

Query: 242 LFVDLDRFKNINDSLGHNQGDRLLQSVARRLQECLRQSDTIVRQGGDEFIVILEDLQLPE 301
           L++DLDRFK +N+SLGH   D LL+ V+RRL   L ++DTI R  GDEF+V+L+      
Sbjct: 562 LYIDLDRFKLLNESLGHEAADALLREVSRRLSTTLAEADTIARLSGDEFVVLLDAYGSLS 621

Query: 302 QAGQIGAKLLETLASPYREDGYDFFLTASIGIALYPDDGDDADTLLRNADTAMYEGKSSG 361
               +G++LL+ +  P   D  +  ++ASIG++L PD+  DA+ LLR A+ AM + K  G
Sbjct: 622 SLAHLGSRLLQRIRKPMVIDEQELVISASIGVSLLPDNSRDAEALLRQANIAMQQAKHLG 681

Query: 362 GNTVRFYTGRMNERLQSRVSLENGLRRALERDELQLYYQPQIDLASGRLLGAEALLRWND 421
           GNT++F+T R        + LEN LR+ALE  +L+++YQP++ LA   L  AEAL+RW  
Sbjct: 682 GNTLQFFTDRPQASSMHYLQLENQLRKALEVGQLEVFYQPRLSLADDSLEAAEALVRWRH 741

Query: 422 GG-RLIPPDQFIPVAEETGLIVPIGLWVLDTAIARAAAWRRHWQLRQGMGATPPRIAINL 480
               L+ P QFIP+AEETGLI+P+G +VL  A  +A  W++        G    R+++NL
Sbjct: 742 PELGLVAPAQFIPLAEETGLIIPLGEFVLREACRQARQWQQD-------GLAAIRVSVNL 794

Query: 481 SARQFWGGGIAEHVLLRLEREGLPPSTIELEVTESVLLRQEADCLEELRRLREAGVGLAL 540
           S +Q   G     V   LE  GLP + +ELE+TES LL    + +    +LR  GV LA+
Sbjct: 795 SVKQLRQGNFVSLVRQVLEETGLPATMLELELTESQLLDDIDNAISISEQLRALGVKLAI 854

Query: 541 DDFGTGYSSLSYLRLLPIDTLKIDKSFIFPLDEDQDGEAAAIVRAILAMAHTLGHKVVAE 600
           DDFGTG+SSLSYL+  P+D +KID+SFI  L  +   + AAI RAI+AM H+L  KVVAE
Sbjct: 855 DDFGTGFSSLSYLKRFPVDYVKIDRSFISEL--EHSSQDAAITRAIIAMVHSLERKVVAE 912

Query: 601 GVERQTQLELLRTMGCDSFQGYLESRPLPPEAFLQ 635
           GVE Q Q++ L+   CD  QGYL S P+P   F +
Sbjct: 913 GVETQAQMDFLKANHCDEIQGYLLSPPVPALQFAE 947



 Score = 54.3 bits (129), Expect = 2e-11
 Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 3/126 (2%)

Query: 84  LAMEGAHDGMWTWNPLSKELTAGQRLHAILGYG-ENFLMDTHAWLTLVHPEDTARYNRAV 142
           LA++ +  G+W W+ L        RL  + G G E    +  + L  +HP+D    +  +
Sbjct: 281 LALDASGLGLWDWD-LQHNRVHHSRLEVVFGVGLEKRHAEDGSLLPDIHPQDLPIVHATL 339

Query: 143 SEHLKGLTPHFYCEYRVRAKSGEYRWIASRG-IAVRDARGVATLMAGSVTDITERKLHEE 201
             HLKG +  F  EYR     G    I  RG +  RDA G A  M G+  DI++ +   E
Sbjct: 340 IAHLKGESEQFAVEYRAVRADGSEICIEDRGRVIQRDASGRALRMIGTRRDISDVRRQAE 399

Query: 202 RMRYLA 207
           + R  A
Sbjct: 400 QQRLAA 405