Pairwise Alignments

Query, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 1278 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  409 bits (1052), Expect = e-118
 Identities = 243/574 (42%), Positives = 338/574 (58%), Gaps = 23/574 (4%)

Query: 70   REIVILRRAARAYELA---MEGAHDGMWTWNPLSKELTAGQRLHAILGYGENFLMDTHAW 126
            R+I   RRA +   +A    E +   +   +P    + A +    + GY    ++D    
Sbjct: 705  RDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFTRVSGYEVAQVLDQLPG 764

Query: 127  LTLVHPEDTARYNRAVSEHLKGLTPHFYCEYRVRAKSGEY--RWIASRGIAVRDARGVAT 184
            +  V  E   R  R +   L G    +  E R++ ++GE+   W+     AV D  G   
Sbjct: 765  MLTVESEQETRL-RHILRQLNGQGT-WEGEIRLKRRNGEHYPAWVGIT--AVLDDEGDLA 820

Query: 185  LMAGSVTDITERKLHEERMRYLAHHDQLTGLPNRLLLADRLPQALTRAKRQQSRAAVLFV 244
                  +DI+ERK  E+R+  LA++D LT LPNR L  DRL  AL  A+RQQ+   ++F+
Sbjct: 821  SYVCFFSDISERKASEDRIHRLAYYDALTHLPNRTLFQDRLHSALQHAERQQAWVVLMFL 880

Query: 245  DLDRFKNINDSLGHNQGDRLLQSVARRLQECLRQSDTIVRQGGDEFIVILEDLQLPE--- 301
            DLDRFK INDSLGH  GDR+LQ +A RL  C+   DT+ R GGDEF ++LE  +  E   
Sbjct: 881  DLDRFKPINDSLGHAAGDRMLQEMATRLLACVSVDDTVARMGGDEFTLLLEPDESREAAL 940

Query: 302  -QAGQIGAKLLETLASPYREDGYDFFLTASIGIALYPDDGDDADTLLRNADTAMYEGKSS 360
             +A  +  ++L +L +P+  +G +FF+TASIGIAL P DG +   L++NADTAMY  K  
Sbjct: 941  NRAIHVAERILTSLITPFVLEGREFFVTASIGIALSPQDGKELSQLMKNADTAMYHAKER 1000

Query: 361  GGNTVRFYTGRMNERLQSRVSLENGLRRALERDELQLYYQPQIDLASGRLLGAEALLRWN 420
            G N  +FY   MN     R+ LE+ LR ALE+ E  L+YQPQ      RL GAEALLRW 
Sbjct: 1001 GKNNFQFYQADMNATALERLELESDLRHALEQKEFTLFYQPQFSGDGKRLTGAEALLRWR 1060

Query: 421  DGGR-LIPPDQFIPVAEETGLIVPIGLWVLDTAIARAAAWRRHWQLRQGMGATPPRIAIN 479
               R L+PP+ FIPV EE GL+V +G WVL    A A    +HW   +      P++++N
Sbjct: 1061 HPRRGLVPPNDFIPVLEELGLVVEVGDWVL----AEACRQLKHWHQAR---VRVPKVSVN 1113

Query: 480  LSARQFWGGGIAEHVLLRLEREGLPPSTIELEVTESVLLRQEADCLEELRRLREAGVGLA 539
            +SARQF  G + + +   LE+ GL P+ +ELE+TES+L+R+  + ++ L  L+  G+ +A
Sbjct: 1114 ISARQFSDGQLGKRIAHILEQAGLSPACLELELTESILMREVNEAMQILDGLKNLGLSIA 1173

Query: 540  LDDFGTGYSSLSYLRLLPIDTLKIDKSFIFPLDEDQDGEAAAIVRAILAMAHTLGHKVVA 599
            +DDFGTGYSSL+YL+  PID LKID++F+  L   +  + A I RAI+AMAH+L   V+A
Sbjct: 1174 VDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGE--QDAQIARAIIAMAHSLNLSVIA 1231

Query: 600  EGVERQTQLELLRTMGCDSFQGYLESRPLPPEAF 633
            EGVE   QLE LR   CD  QGYL  RP+PP  F
Sbjct: 1232 EGVETHEQLEFLREHDCDEVQGYLFGRPMPPAQF 1265



 Score = 32.0 bits (71), Expect = 2e-04
 Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 18/214 (8%)

Query: 6   PLILGTADSTPPQGVGLHRSWHSWPPLLLLAACISAGLAAVYVEQPWLSW---------- 55
           PLI G + S P  G+ + ++  +  P L L  C++   A    +  WL            
Sbjct: 368 PLIEGESRSRPGVGIPIIQAVLAGQPRLELEICLTR--AGGQDQHLWLVMRLPETRGDFD 425

Query: 56  LTFLACGVAAVCSVREIVILRRAARAYELAMEGAHDGMWTWNPLSKE-LTAGQRLHAILG 114
              L+ G        E+ +L R +  +   ++   D ++  + LS+  + +       LG
Sbjct: 426 AVILSIGDITSRKQVELSLLDRES-FWSDVVQTVPDHLYVQDVLSQRVIYSNHHFGYTLG 484

Query: 115 YGENFL--MDTHAWLTLVHPEDTARY-NRAVSEHLKGLTPHFYCEYRVRAKSGEYRWIAS 171
           Y ++ L  M    W  L+HP+D   Y +  + +   G         R R +   +R    
Sbjct: 485 YSKSELHAMGEFFWEVLLHPDDARHYQDMRLRQRHHGHNELLQSVLRFRDRESNWRSFDI 544

Query: 172 RGIAVR-DARGVATLMAGSVTDITERKLHEERMR 204
           R  A+  DA    T + G   DITE+    + +R
Sbjct: 545 REQALAWDAEDRVTRIIGIAKDITEQVASSQSLR 578