Pairwise Alignments

Query, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  385 bits (989), Expect = e-111
 Identities = 213/460 (46%), Positives = 288/460 (62%), Gaps = 11/460 (2%)

Query: 175 AVRDARGVATLMAGSVTDITERKLHEERMRYLAHHDQLTGLPNRLLLADRLPQALTRAKR 234
           AVR   G  T    ++TDIT+RK  EE +R+ A+ D LT LPNR L+ DRL QA+ +A+R
Sbjct: 381 AVRTRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQR 440

Query: 235 QQSRAAVLFVDLDRFKNINDSLGHNQGDRLLQSVARRLQECLRQSDTIVRQGGDEFIVIL 294
              +  V+F+DLDRFK INDS GH+ GD +L+  ARRL+ C+R SD++ R GGDEFIVIL
Sbjct: 441 TGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVIL 500

Query: 295 EDLQLPEQAGQIGAKLLETLASPYREDGYDFFLTASIGIALYPDDGDDADTLLRNADTAM 354
            +++       I  K+L +L+ P+   G + F   S+GI  +PD G+ A  LLRNAD AM
Sbjct: 501 SNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAM 560

Query: 355 YEGKSSGGNTVRFYTGRMNERLQSRVSLENGLRRALERDELQLYYQPQIDLASGRLLGAE 414
           Y  K  G      +T  M  R  + +++E+ LR AL RDE +L++QP++  A   L+GAE
Sbjct: 561 YHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKV-RADLTLIGAE 619

Query: 415 ALLRWNDGGR-LIPPDQFIPVAEETGLIVPIGLWVLDTAIARAAAWRRHWQLRQGMGATP 473
           AL+RW    + LI P  FIP+AEE+GLI+PIG W L  A  R  +WR         G T 
Sbjct: 620 ALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAE-------GLTI 672

Query: 474 PRIAINLSARQFWGGGIAEHVLLRLEREGLPPSTIELEVTESVLLRQEADCLEELRRLRE 533
           P +++N+S RQF    + E V   L   GL P  ++LE+TE+V+       +  LR L++
Sbjct: 673 PSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKD 732

Query: 534 AGVGLALDDFGTGYSSLSYLRLLPIDTLKIDKSFIFPLDEDQDGEAAAIVRAILAMAHTL 593
            GV L++DDFGTGYSSL+YL+  PIDTLKID++F+   D    G+ AAIV  I+A+A  L
Sbjct: 733 LGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFV--RDVLHSGKDAAIVSTIIALARNL 790

Query: 594 GHKVVAEGVERQTQLELLRTMGCDSFQGYLESRPLPPEAF 633
           G  VVAEGVE   Q E L +  C +FQG+L SRPLPP  F
Sbjct: 791 GFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEF 830



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 39/154 (25%), Positives = 53/154 (34%), Gaps = 10/154 (6%)

Query: 75  LRRAARAYELAMEGAHDGMWTWNPLSKELTAGQRLHAILGYGENFLMDTH----AWLTLV 130
           LR A   Y    E A +G++   P    L     L  I GY     +  H    A    V
Sbjct: 159 LRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIAHFTDIASQLYV 218

Query: 131 HPEDTARYNRAVSEHLKGLTPHFYCEYRVRAKSGEYRWIASRGIAVRDARGVATLMAGSV 190
                  + R + E   G    F  E  V    G   WI      VR          G+V
Sbjct: 219 DGTKRGEFQRLMRE--TGEVRDFTAE--VWRCDGHTIWITENARCVRGPDNEVLYYEGTV 274

Query: 191 TDITERKLHEERMRYLAHHDQLTGLPNRLLLADR 224
            DIT ++  +E MR L      T +   ++L +R
Sbjct: 275 EDITAQRQSQETMRLLG--KVFTSIAEGIVLLER 306