Pairwise Alignments

Query, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 1228 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  399 bits (1024), Expect = e-115
 Identities = 215/454 (47%), Positives = 291/454 (64%), Gaps = 11/454 (2%)

Query: 176  VRDARGVATLMAGSVTDITERKLHEERMRYLAHHDQLTGLPNRLLLADRLPQALTRAKRQ 235
            VRD  G  +   GS TDI+ERK++EER+ +LAHHD LT LPNRL L  RL +    A   
Sbjct: 772  VRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFIS 831

Query: 236  QSRAAVLFVDLDRFKNINDSLGHNQGDRLLQSVARRLQECLRQSDTIVRQGGDEFIVILE 295
            Q++ AV+F+D+D FKNIND+LGH+ GD LL  VARRL+  +   D + R GGDEF+V+L 
Sbjct: 832  QTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLS 891

Query: 296  DLQLPEQAGQIGAKLLETLASPYREDGYDFFLTASIGIALYPDDGDDADTLLRNADTAMY 355
            D    ++  ++   L   L   Y  D      + SIGI+L+P DGD  + L++NAD AMY
Sbjct: 892  DTD-HDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMY 950

Query: 356  EGKSSGGNTVRFYTGRMNERLQSRVSLENGLRRALERDELQLYYQPQIDLASGRLLGAEA 415
              K++G N  +F+T  MN  +  R  +E GLR+A+  +EL LYYQPQ+D++SG+++G EA
Sbjct: 951  RAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEA 1010

Query: 416  LLRWNDGG-RLIPPDQFIPVAEETGLIVPIGLWVLDTAIARAAAWRRHWQLRQGMGATPP 474
            L+RW      L+ PD+FIP+AEE  +I+PIG WVL+ A+A+ A WR         GA   
Sbjct: 1011 LIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWR-------DKGAKGL 1063

Query: 475  RIAINLSARQFWGGGIAEHVLLRLEREGLPPSTIELEVTESVLLRQEADCLEELRRLREA 534
            R+A+NLSA Q     I   ++  L +  L    +ELE+TESV ++      + L  LR+ 
Sbjct: 1064 RMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQH 1123

Query: 535  GVGLALDDFGTGYSSLSYLRLLPIDTLKIDKSFIFPLDEDQDGEAAAIVRAILAMAHTLG 594
            G+ LA+DDFGTGYSSLSYL+LLP+D LK+D+SF+   D + D   AAI  A ++MAH LG
Sbjct: 1124 GIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFV--KDIESDPNDAAISAATISMAHELG 1181

Query: 595  HKVVAEGVERQTQLELLRTMGCDSFQGYLESRPL 628
              VVAEGVE + QL LL  MGCD  QGY  S+PL
Sbjct: 1182 LTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPL 1215