Pairwise Alignments

Query, 1198 a.a., transcription-repair coupling factor Mfd from Dechlorosoma suillum PS

Subject, 1160 a.a., helicase from Burkholderia phytofirmans PsJN

 Score = 1502 bits (3889), Expect = 0.0
 Identities = 756/1135 (66%), Positives = 907/1135 (79%), Gaps = 5/1135 (0%)

Query: 65   LPRSGERLHLPPLAGSADALALARLGSQARSQKRLLAVLTASPADAQRLLEEIPWFAPDL 124
            L ++G+R       GS+DAL +AR     R +  LLAV+  S  DAQRL +EI +FAP+ 
Sbjct: 16   LVKAGQRFAFDGTHGSSDALLIARYHLAYREKVPLLAVVCESAVDAQRLAQEIGFFAPEA 75

Query: 125  KVRLLPDWETLPYDNFSPHHDLVSERLATLYAVSRGECEVLLVPATTAVYRLTPPSYLAA 184
            +VRLLPDWETLPYD FSPH DLVSERLATL+ +  G C++LLVPATTA+YR+ P S+LAA
Sbjct: 76   RVRLLPDWETLPYDTFSPHQDLVSERLATLHDLGEGRCDILLVPATTALYRMPPASFLAA 135

Query: 185  YTFFLKKGEKLDAEQFRSQLTLAGYTHVTQVVSPGEYSIRGGLVDLFPMGSALPYRIDLF 244
            YTF   +GE+LD  + ++QLTLAGY HV+QVV PGEY +RG L+DL+PMGS LPYRIDLF
Sbjct: 136  YTFSFAQGERLDEARIKAQLTLAGYEHVSQVVRPGEYCVRGSLLDLYPMGSPLPYRIDLF 195

Query: 245  DEEIETLRTFDADTQRSLYPVPEIRLLPAREFPLDDGGRTRFRQRFREVFEGDPAKSGIY 304
            D++++++R FD DTQRSLYPV ++RLLP REFP D+  RT FR R+RE FEGDP+++ IY
Sbjct: 196  DDQVDSIRAFDPDTQRSLYPVKDVRLLPGREFPFDEAARTAFRSRWRETFEGDPSRAAIY 255

Query: 305  KDVSNGVPSAGIEYWLPLFFEETATLFDYLPKDAVLCQHRDVALALQDFWRDTQSRYNML 364
            KD+ NGVPSAGIEY+LPLFFE+TATLF YLP+ A L    D+  A++ F  DT+ RYN L
Sbjct: 256  KDIGNGVPSAGIEYYLPLFFEDTATLFHYLPEGAQLAFVGDLDAAIRRFTNDTKQRYNFL 315

Query: 365  AGDKARPLLPPAELFLSEEQFFVAAKDYAKLILGTPAEGMPPLATAVPTVAVERRAEDPL 424
            + D+ RP+L P  LFLS+E FF  AK +A+L L  PA      +T +P +A++R AEDP+
Sbjct: 316  SHDRDRPILEPQRLFLSDEDFFTLAKPFARLSL--PANAGGGWSTPLPNLAIDRHAEDPV 373

Query: 425  TALKQFIAGRQGRRTLLLAESAGRRETLQQLLLEHGLKPAASADFAAFLGGDAPLALGVA 484
              L+ ++      R L  AESAGRRETL QLL ++ L+P +S  F  +L  D   +LGVA
Sbjct: 374  AGLRAYL-DTTPNRVLFAAESAGRRETLLQLLADNHLRPVSSDSFQDWLTSDERFSLGVA 432

Query: 485  PLQSGFCL--DGLAIITETELYAGSPNRRSRQNAQRRASMDNWLRDLTELKVGDPVVHES 542
            PL +GF +  DG+AIITETELY     R  R+  ++ +++D+ +RDL+ELKVGDPVVH  
Sbjct: 433  PLANGFAVPVDGIAIITETELYGPLARRAGRRRQEQASNVDSMVRDLSELKVGDPVVHSQ 492

Query: 543  HGIGRYMGLLHLDLGEGDTEFLELHYANEAKLYVPVSQLHVISRYSGNEPDAAPLHSLGS 602
            HGIGRYMGL+ +DLGEG+TEFL L YA ++KLYVPV+QLHVISRYSG +P++APLHSLGS
Sbjct: 493  HGIGRYMGLVTMDLGEGETEFLHLEYAGDSKLYVPVAQLHVISRYSGADPESAPLHSLGS 552

Query: 603  GQWEKAKKKAAEQARDTAAELLALYAARAARQGHAFAFTENDYEAFADGFGFEETEDQAT 662
            GQWEKAK+KAA+Q RDTAAELL LYA RA RQGHAFA    DY  FA+ FGFEET DQA 
Sbjct: 553  GQWEKAKRKAAQQIRDTAAELLNLYARRALRQGHAFALEPKDYVKFAESFGFEETPDQAA 612

Query: 663  AIAAVIEDMKSGKPMDRLVCGDVGFGKTEVALRAAFVAVAGGKQVAVLCPTTLLCEQHYQ 722
            AIAAVI DM SGKPMDRLVCGDVGFGKTEVALRAAF+AV GGKQVA+L PTTLL EQH Q
Sbjct: 613  AIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQ 672

Query: 723  TFKDRFADWPVQIAELSRFKTAKETAQAMKDLEAGKIDIVIGTHKLLSKEMKFDRLGLVM 782
            TF DRF+DWPV+IAELSRFK+ KE + A++ +  G +DIVIGTHKLLS +++F RLGLV+
Sbjct: 673  TFSDRFSDWPVRIAELSRFKSTKEVSAAIQQINEGTVDIVIGTHKLLSSDVQFKRLGLVI 732

Query: 783  IDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLAMSLEGLRDFSVIATAPQKRLAIK 842
            IDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTL M+LEGLRDFSVIATAPQKRLAIK
Sbjct: 733  IDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIK 792

Query: 843  TFVAKFSDGIIREAVLRELKRGGQVYFLHNEVDTIDNMREKLQSLVPEARIVVGHGQMNE 902
            TFV +  D +IREA+LRELKRGGQVYFLHNEV+TI+N R+ L++LVPEARI V HGQM+E
Sbjct: 793  TFVRREEDSVIREAMLRELKRGGQVYFLHNEVETIENRRQMLEALVPEARIAVAHGQMHE 852

Query: 903  RELERVMRDFTQQRANLLLCTTIIETGIDNPHANTILINRAEKFGLAQLHQLRGRVGRSH 962
            RELERVMRDF  QRAN+LLCTTIIETGID P ANTILI+RA+KFGLAQLHQLRGRVGRSH
Sbjct: 853  RELERVMRDFVAQRANVLLCTTIIETGIDVPSANTILIHRADKFGLAQLHQLRGRVGRSH 912

Query: 963  HQAYSYLLVQDEKALTKQAKQRLEAIQHMEELGAGFYLAMHDLEIRGAGEVLGENQSGEM 1022
            HQAYSYLLV D + LTKQA++RLEAIQ MEELG+GFYLAMHDLEIRG GEVLG+ QSGE+
Sbjct: 913  HQAYSYLLVHDPQGLTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEI 972

Query: 1023 QEVGFNLYTEMLNRAVAALKQGREPDLTQPLGVTTEINLHAPALLPDAYAPDVHERLTLY 1082
             E+GF LYT+MLN AV ALK+G+EPDLT PL  TTEINLHA A+LP  Y  DV ERL+LY
Sbjct: 973  HEIGFQLYTDMLNDAVKALKEGKEPDLTAPLAATTEINLHASAILPADYCGDVQERLSLY 1032

Query: 1083 KRLSNCETEEDINALQEELIDRFGELPPQGQCLLATHRLRLLARPLGIVKLDATASQLTV 1142
            KRL+NCE  + I+ +QEELIDRFG+LPPQ   L+ THRLRL A+PLGI K+DA  + + +
Sbjct: 1033 KRLANCEHNDSIDGIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGISKIDAGEAVIGL 1092

Query: 1143 QFCPNPPIEPIRIIELIQKNRHFKLAGQDKLAVVRHMPTLKERVDAVKDLFRQLG 1197
            QF PNPPI+ +RIIE++QK++H KLAGQDKL +    P L  RV  VK+  R LG
Sbjct: 1093 QFIPNPPIDAMRIIEMVQKHKHIKLAGQDKLRIETRSPDLAVRVATVKETLRALG 1147