Pairwise Alignments

Query, 867 a.a., DNA mismatch repair protein MutS from Dechlorosoma suillum PS

Subject, 859 a.a., DNA mismatch repair protein MutS from Pseudomonas stutzeri RCH2

 Score =  879 bits (2270), Expect = 0.0
 Identities = 483/876 (55%), Positives = 608/876 (69%), Gaps = 35/876 (3%)

Query: 3   TKKNSDPSGHTPMMQQYLALKSQHPGTLLFYRMGDFYELFFEDAEKAARLLDITLTTRGQ 62
           TK N+D S HTPMMQQY  LK +HP  L+FYRMGDFYELF++DA+KAA LLDITLT RGQ
Sbjct: 2   TKPNADLSAHTPMMQQYWKLKREHPDQLMFYRMGDFYELFYDDAKKAAALLDITLTARGQ 61

Query: 63  SAGLPIKMAGVPYHAVEQYLAKLVKMGESVVICEQVGDPATSKGPVERAVSRIVTPGTLT 122
           SAG  I MAG+P+H+ E YLA+LVK+GESVVICEQ+GDPATSKGPVER V RI+TPGT++
Sbjct: 62  SAGTAIPMAGIPFHSAEGYLARLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVS 121

Query: 123 DAALLDEKRDTLLMALTGGRGVWGLAWLNLASGEFRVSEV-ATEKLAATLERIRPAEVLL 181
           D ALLDE+RD LL A+ G   ++GL+ L++ASG F V E+   E L A LER+ PAE+L+
Sbjct: 122 DEALLDERRDNLLAAVVGDEKLFGLSVLDIASGRFSVQELKGWETLLAELERLSPAELLI 181

Query: 182 PDSLVPEVNISA--ATTRRPDWHFDAEAAKRLLLEHFKVQSLTAFAAEDLRPALGAAGAL 239
           PD     + +       RR  W FD ++A + L + F  Q L  F  E+L  A+GAAG L
Sbjct: 182 PDDWPQGLPLEKRRGVRRRAPWDFDRDSAFKSLCQQFSTQDLKGFGCENLTLAIGAAGCL 241

Query: 240 LQYAQATQTQALPHVQGLMVERESAYLGLDAATRRNLELTETLRGEASPTLFSLLDSCIT 299
           L YA+ TQ  ALPH++ L  ER    + LD A+RRNLEL   L G    TL S++D C T
Sbjct: 242 LAYAKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDVNLAGGRENTLQSVMDRCQT 301

Query: 300 AMGARYLRHALHHPRRDRAVPAARIDAIGALMADHLALAQYLRSGLKGFADVERIAGRIA 359
           AMG+R L   L+ P R+R +  AR D+I  L+ +H    Q L+  LK   D+ERI  RI 
Sbjct: 302 AMGSRLLTRWLNRPLRNREILEARQDSITCLL-EHYRFEQ-LQPQLKDIGDLERILARIG 359

Query: 360 LRNARPRDLSSLRDSLACLEELRRPLAGHPSPLLGELWGQLEAPVEAIELLLRAIAQEPA 419
           LRNARPRDL+ LRD+LA L +L+  +    +P L EL   +    E  ELL RAI   P 
Sbjct: 360 LRNARPRDLARLRDALAALPQLQAGMQDLVAPHLLELATSISTYPELAELLARAIIDNPP 419

Query: 420 AMVRDGGVMATGFDAELDELRALNDNCGAFLVDLEAREKERTGIATLKVEYNRVHGFYIE 479
           A++RDGGV+ TG+D ELDEL++L++N G +L+DLE REK RTG+A LKV YNRVHG++IE
Sbjct: 420 AVIRDGGVLKTGYDPELDELQSLSENAGQYLMDLETREKARTGLANLKVGYNRVHGYFIE 479

Query: 480 VTHANADKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALAREKWLYEQVLDQLQ 539
           +    A+  P DY RRQTLK AER+ITPELK FEDKALSA+ RALAREK LY+++L+ L 
Sbjct: 480 LPSKQAESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKLLYDELLEMLI 539

Query: 540 PVVPQLQAVARALAQLDMLASFADTAVARNWCRPEFTDRPGLWLEAGRHPVVENELQAQG 599
             +  LQ  A ALA+LD+L++ A+ A+  +  RP F ++P + +E GRHPVVE  L+   
Sbjct: 540 GHLAPLQESAAALAELDVLSNLAERALNLDLNRPRFVEQPCMRIEQGRHPVVEQVLET-- 597

Query: 600 DTFIPNDLDLGESEDAERRLLLITGPNMGGKSTYMRQTALIALLAHVGCYVPAKAARLGP 659
             F+ NDL L    D   R+L+ITGPNMGGKSTYMRQTALI LLA +G +VPA A  L  
Sbjct: 598 -PFVANDLGL----DDATRMLVITGPNMGGKSTYMRQTALIVLLAQIGSFVPAAACELSL 652

Query: 660 MDQIFTRIGASDDLASGRSTFMVEMTESAAILHNATEQSLVLMDEVGRGTSTFDGMALAM 719
           +D+IFTRIG+SDDLA GRSTFMVEM+E+A ILHNA+++SLVLMDEVGRGTSTFDG++LA 
Sbjct: 653 VDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNASDRSLVLMDEVGRGTSTFDGLSLAW 712

Query: 720 AILRHLLEKNRSLTLFATHYFELTRLAHEYPALVNVHLDAVEHGDRIVFLHAVEEGPANQ 779
           A   H L K R+ TLFATHYFELT L    P + NVHL A EH +RIVFLH V  GPA+Q
Sbjct: 713 AAAEH-LAKLRAFTLFATHYFELTVLPESEPVVANVHLSATEHNERIVFLHHVLPGPASQ 771

Query: 780 SYGIQVAALAGIPSAVVRAAKKELRQLETRA------------AVDPLQPDLFAAVPAPD 827
           SYG+ VA LAG+P  V++ A+  L +LET +               P+Q DLFA++P   
Sbjct: 772 SYGLAVAQLAGVPGEVIQRARDHLSRLETTSLAHEAPRIAPGQPAPPMQSDLFASLP--- 828

Query: 828 EGPEAPAHPALERLGEIDPDSLSPREALDLLYELKT 863
                  HP LE LG I+PD ++PR+ALDLLY LK+
Sbjct: 829 -------HPVLEELGRINPDDVTPRQALDLLYSLKS 857