Pairwise Alignments

Query, 867 a.a., DNA mismatch repair protein MutS from Dechlorosoma suillum PS

Subject, 916 a.a., DNA mismatch repair protein MutS from Sinorhizobium meliloti 1021

 Score =  585 bits (1507), Expect = e-171
 Identities = 364/887 (41%), Positives = 512/887 (57%), Gaps = 43/887 (4%)

Query: 13  TPMMQQYLALKSQHPGTLLFYRMGDFYELFFEDAEKAARLLDITLTTRGQSAGLPIKMAG 72
           TPMM+Q++ +K+ +P +LLFYRMGDFYELFF+DA +A+R L ITLT RGQ  G  I M G
Sbjct: 30  TPMMEQFIEIKANNPDSLLFYRMGDFYELFFQDAVEASRALGITLTKRGQHMGQEIPMCG 89

Query: 73  VPYHAVEQYLAKLVKMGESVVICEQVGDPAT-----SKGPVERAVSRIVTPGTLTDAALL 127
           VP HA + YL KL+  G  V +CEQV DPA      SK  V R V R+VTPGT+T+  LL
Sbjct: 90  VPVHAADDYLQKLIASGYRVAVCEQVEDPAEAKKRGSKSVVRRDVVRLVTPGTITEDKLL 149

Query: 128 DEKRDTLLMAL----TGGRGVWGLAWLNLASGEFRVSEVATEKLAATLERIRPAEVLLPD 183
                  LMAL    +G    + LAW+++++G FR++E A  +L A + RI P E++LPD
Sbjct: 150 SPSESNYLMALARIRSGSEPAYALAWIDISTGIFRLAETAESRLLADILRIEPRELILPD 209

Query: 184 SLVPEVNI-------SAATTRRPDWHFDAEAAKRLLLEHFKVQSLTAFAAEDLRPALGAA 236
           ++  + ++             +P   FD+  A+  +  ++ V +L  F +   R  L AA
Sbjct: 210 TVFHDPDLRPVFDVLGRVAVPQPAVLFDSATAEGRISRYYGVGTLDGFGSFS-RAELAAA 268

Query: 237 GALLQYAQATQTQALPHVQGLMVERESAY--LGLDAATRRNLELTETLRGEASPTLFSLL 294
            A + Y + TQ Q  P +   + ERESA   L +D ATR NLEL +TL G    +L   L
Sbjct: 269 SAAVSYVEKTQLQERPALG--IPERESAASTLFIDPATRANLELAKTLSGSRDGSLLKSL 326

Query: 295 DSCITAMGARYLRHALHHPRRDRAVPAARIDAIGALMADHLALAQYLRSGLKGFADVERI 354
           D  +T+ GAR L   L  P  D      R+D+I  L AD       +R  L+   D+ R 
Sbjct: 327 DRTMTSGGARLLAERLMSPLTDPERINQRLDSIEVL-ADQPRFTTDVRDALRRAPDMPRA 385

Query: 355 AGRIALRNARPRDLSSLRDSLACLEELRRPLAGHPSPLLGELWGQLEA----PVEAIELL 410
             R+AL    PRDL +++  +     +   L+G  + L  EL    +A    P E +  L
Sbjct: 386 LSRLALGRGGPRDLGAIQAGMRAAAAISALLSG--AELSAELTEARDAIAALPGELLARL 443

Query: 411 LRAIAQEPAAMVRDGGVMATGFDAELDELRALNDNCGAFLVDLEAREKERTGIATLKVEY 470
              +A+E   + RDGG +  G  AELDE+RAL D     +  L+ +  E TGI +LK+++
Sbjct: 444 DATLAEELPLLKRDGGFVREGASAELDEMRALRDQSRRVIAGLQLQYCEETGIKSLKIKH 503

Query: 471 NRVHGFYIEVTHANADKVPDD------YRRRQTLKNAERYITPELKAFEDKALSAQDRAL 524
           N V G++IEVT  NA  + D       +  RQT+ NA R+ T EL   E K  +A DRAL
Sbjct: 504 NNVLGYFIEVTAGNAGSMTDTDAGRARFIHRQTMANAMRFTTTELAELETKIANAADRAL 563

Query: 525 AREKWLYEQVLDQLQPVVPQLQAVARALAQLDMLASFADTAVARNWCRPEFTDRPGLWLE 584
           A E   +E ++ ++      ++A A ALA +D+ A  A  A  +N+ RP         ++
Sbjct: 564 AIELETFEAMVREVVAEAEAIKAAALALATIDVSAGLAVLAEEQNYTRPTVDRSRMFAID 623

Query: 585 AGRHPVVENELQAQG-DTFIPNDLDLGESEDAERRLL-LITGPNMGGKSTYMRQTALIAL 642
            GRHPVVE  L+ Q  + F+ N  DL      +   + L+TGPNMGGKST++RQ ALIA+
Sbjct: 624 GGRHPVVEQALRRQAANPFVANGCDLSPPNGEQGGAIWLLTGPNMGGKSTFLRQNALIAI 683

Query: 643 LAHVGCYVPAKAARLGPMDQIFTRIGASDDLASGRSTFMVEMTESAAILHNATEQSLVLM 702
           +A  G +VPA AA +G +D++F+R+GASDDLA GRSTFMVEM E+AAIL+ AT++SLV++
Sbjct: 684 MAQTGSFVPAAAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVIL 743

Query: 703 DEVGRGTSTFDGMALAMAILRHLLEKNRSLTLFATHYFELTRLAHEYPALVNVHLDAVEH 762
           DE+GRGT+TFDG+++A A + HL E NR   LFATH+ ELT L+ +   L N  +   E 
Sbjct: 744 DEIGRGTATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLVRLSNATMRVKEW 803

Query: 763 GDRIVFLHAVEEGPANQSYGIQVAALAGIPSAVVRAAKKELRQLETRAAVDPLQP----- 817
              ++FLH V  G A++SYGIQVA LAG+P++VV  A+  L +LE     +P        
Sbjct: 804 DGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVARARDVLAKLEDADRKNPASQLIDDL 863

Query: 818 DLFAAVPAPDEGPEAPAHPAL--ERLGEIDPDSLSPREALDLLYELK 862
            LF      +E   A + P+   E L  ++PD ++PREALD LY LK
Sbjct: 864 PLFQVAVRREEAARASSGPSKVEEALKALNPDDMTPREALDALYALK 910