Pairwise Alignments

Query, 867 a.a., DNA mismatch repair protein MutS from Dechlorosoma suillum PS

Subject, 894 a.a., DNA mismatch repair protein MutS from Herbaspirillum seropedicae SmR1

 Score =  963 bits (2489), Expect = 0.0
 Identities = 529/899 (58%), Positives = 647/899 (71%), Gaps = 52/899 (5%)

Query: 8   DPSGHTPMMQQYLALKSQHPGTLLFYRMGDFYELFFEDAEKAARLLDITLTTRGQSAGLP 67
           D + HTPMMQQYL +K+ HP TL+FYRMGDFYELFFEDAEKA+RL+ +TLT RG S G P
Sbjct: 4   DLAAHTPMMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSNGTP 63

Query: 68  IKMAGVPYHAVEQYLAKLVKMGESVVICEQVGDPATSKGPVERAVSRIVTPGTLTDAALL 127
           IKMAGVP+H+VEQYLA+L+K+GESV ICEQ+GDPATSKGPVER V R+VTPGTLTD+ LL
Sbjct: 64  IKMAGVPFHSVEQYLARLIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDSDLL 123

Query: 128 DEKRDTLLMAL------TGGRGVWGLAWLNLASGEFRVSEVATE------KLAATLERIR 175
            EK +  L+A+      +  +   GL+WL++ASG  ++ E   E      ++   LERI 
Sbjct: 124 PEKAERCLLAMQLVPSKSRKQMQVGLSWLSMASGALKMMEFTVEAALLDGRVKQELERIS 183

Query: 176 PAEVLLPDSLVP--EVNISAATTRRPDWHFDAEAAKRLLLEHFKVQSLTAFAAEDLRPAL 233
            AEVL+ D  +   E  +       PDWHFD  ++++ LL+   V +L  F A+ L PA+
Sbjct: 184 AAEVLVADGQLEWCEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLGPAI 243

Query: 234 GAAGALLQYAQATQTQALPHVQGLMVERESAYLGLDAATRRNLELTETLRGE----ASPT 289
            AAGALL+YAQ+TQ + L HV+ L VE E+ ++GLDAATRRNLELTET+R +     +PT
Sbjct: 244 CAAGALLRYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRSQDANALAPT 303

Query: 290 LFSLLDSCITAMGARYLRHALHHPRRDRAVPAARIDAIGALMADHLALAQYLRSGLKGFA 349
           LFS LD C TAMG+R LRH LHH  RD+ V  AR  AI ALM         L + L    
Sbjct: 304 LFSTLDHCRTAMGSRLLRHWLHHALRDQQVARARHAAINALMRTDACSG--LSATLAAVP 361

Query: 350 DVERIAGRIALRNARPRDLSSLRDSLACLEELRR--PLAGHPSP--LLGELWGQLEAPVE 405
           D+ERI  RIAL +ARPRDL+ LR  L  L  LR    + G  +   LL +L   L  PVE
Sbjct: 362 DIERITTRIALLSARPRDLAGLRAGLQQLGSLRAYVEMCGRDADASLLTQLHEDLATPVE 421

Query: 406 AIELLLRAIAQEPAAMVRDGGVMATGFDAELDELRALNDNCGAFLVDLEAREKERTGIAT 465
            ++LL RAI  EPAAMVRDGGV+A GFDAELDELR L++N G +L+DLEARE+ERTGIA 
Sbjct: 422 CLDLLERAIMLEPAAMVRDGGVIARGFDAELDELRGLSENAGQYLLDLEARERERTGIAN 481

Query: 466 LKVEYNRVHGFYIEVTHANADKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALA 525
           L+VEYN+VHGFYIEVTH   DKVP+DYRRRQTLKNAERYI PELKAFEDKALSAQ+R+L+
Sbjct: 482 LRVEYNKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSLS 541

Query: 526 REKWLYEQVLDQLQPVVPQLQAVARALAQLDMLASFADTAVARNWCRPEFTDRPGLWLEA 585
           REK+LYEQ+L  +   + +LQA+A ALAQLD L + AD AV  NWC P+  D P + +E 
Sbjct: 542 REKFLYEQLLGDMGAHIVRLQAIAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQIEQ 601

Query: 586 GRHPVVENELQAQGDTFIPNDLDLGESEDAERRLLLITGPNMGGKSTYMRQTALIALLAH 645
           GRHPVVEN+++     FI ND  L     AERRLLLITGPNMGGKS +MRQ ALI LLA+
Sbjct: 602 GRHPVVENQIER----FIANDCQLA----AERRLLLITGPNMGGKSIFMRQVALITLLAY 653

Query: 646 VGCYVPAKAARLGPMDQIFTRIGASDDLASGRSTFMVEMTESAAILHNATEQSLVLMDEV 705
           VG +VPA +A +GP+D+IFTRIGA+DDLA GRSTFMVEMTESAAIL+NATE SLVLMDEV
Sbjct: 654 VGSFVPATSAVIGPVDRIFTRIGAADDLAGGRSTFMVEMTESAAILNNATEHSLVLMDEV 713

Query: 706 GRGTSTFDGMALAMAILRHLLEKNRSLTLFATHYFELTRLAHEYPALVNVHLDAVEHGDR 765
           GRGTSTFDG+ALA AI +HL++  RS TLFATHYFELT+L   +P   NVHL AVEH D 
Sbjct: 714 GRGTSTFDGLALAWAIAKHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDS 773

Query: 766 IVFLHAVEEGPANQSYGIQVAALAGIPSAVVRAAKKELRQLETRAAVDPLQPDLFAAVPA 825
           IVFLHAV+ GPA+QSYG+QVA LAG+P+ V+RAA+K L  LE+++     Q DLF+A PA
Sbjct: 774 IVFLHAVQSGPASQSYGLQVAQLAGVPAQVIRAARKHLSALESQSMQATPQFDLFSA-PA 832

Query: 826 ---------PDEG----------PEAPAHPALERLGEIDPDSLSPREALDLLYELKTLQ 865
                    PD            P+  A   L+ L +IDPD+L+PR+AL+ LY+LK LQ
Sbjct: 833 FATPGTQDEPDPADERSESDAVEPDPLAQALLQTLAQIDPDALTPRQALEALYQLKALQ 891