Pairwise Alignments

Query, 867 a.a., DNA mismatch repair protein MutS from Dechlorosoma suillum PS

Subject, 877 a.a., DNA mismatch repair protein MutS (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  639 bits (1648), Expect = 0.0
 Identities = 387/878 (44%), Positives = 529/878 (60%), Gaps = 37/878 (4%)

Query: 13  TPMMQQYLALKSQHPGTLLFYRMGDFYELFFEDAEKAARLLDITLTTRGQSAGLPIKMAG 72
           TPMM QYL +K  H   LLFYRMGDFYE+FF+DA +AA  LDI LT RG+     I M G
Sbjct: 7   TPMMAQYLEIKQDHADALLFYRMGDFYEMFFDDAVEAAAALDIALTKRGKHDDADIPMCG 66

Query: 73  VPYHAVEQYLAKLVKMGESVVICEQVGDPAT-----SKGPVERAVSRIVTPGTLTDAALL 127
           VP HA E YL  L++ G  V +CEQ+ DPA      SK  V R V R+VTPGTLT+A+LL
Sbjct: 67  VPVHAAEGYLLTLIRKGFRVAVCEQMEDPAEAKKRGSKSVVRREVVRLVTPGTLTEASLL 126

Query: 128 DEKRDTLLMALTGGRGVWGLAWLNLASGEFRVSEVATEKLAATLERIRPAEVLLPD---- 183
           + +R   L A    R    LAW+++++GEFRV      +L+  L R+ P EVLL +    
Sbjct: 127 EARRHNYLAAFAKVRDDSALAWVDISTGEFRVMACPAARLSVDLARLAPREVLLAEGNDL 186

Query: 184 -SLVPEVNISAATTRRPDWHFDAEAAKRLLLEHFKVQSLTAFAAEDLRPALGAAGALLQY 242
            SLV E   +A    R    FD+ AA   L   + V  L AF + + R  L A GA++ Y
Sbjct: 187 RSLVEEHEAAATELGRAS--FDSTAAVDRLCRLYGVADLEAFGSFE-RADLSAMGAIVGY 243

Query: 243 AQATQTQALPHVQGLMVERESAYLGLDAATRRNLELTETLRGEASPTLFSLLDSCITAMG 302
            + TQ   LP ++  + ER    L +DAATRRNLELT++L G     L +++D  +TA G
Sbjct: 244 LELTQKGKLPLLRKPVKERAQHGLQIDAATRRNLELTQSLSGGREGALLTVIDRTVTAQG 303

Query: 303 ARYLRHALHHPRRDRAVPAARIDAIG-ALMADHLALAQYLRSGLKGFADVERIAGRIALR 361
           AR L   L  P  D ++   R + +  AL A  +     +R+ L+   D++R   R+AL 
Sbjct: 304 ARLLARRLASPSADLSIIRTRHEGVRYALEAPEIL--DTVRTALRQVPDMDRALSRLALD 361

Query: 362 NARPRDLSSLRDSLACLEELRRPLAGHPSPLLGELWGQLEAPV---EAI-ELLLRAIAQE 417
              PRDL+++R+ LA    L   L   P   L  LW Q ++     +A+ +LL +A+  E
Sbjct: 362 RGGPRDLAAIRNGLAQAATLAEAL---PDDALPPLWAQSKSRFFGHDALRDLLEKALIAE 418

Query: 418 PAAMVRDGGVMATGFDAELDELRALNDNCGAFLVDLEAREKERTGIATLKVEYNRVHGFY 477
           P  + RDGG +A+G++ +LDE R L D     +  ++A   E TGIA+LKV++N V G++
Sbjct: 419 PPLLTRDGGFVASGYNVDLDEARQLRDEGRGVIAGMQAEYAEATGIASLKVKHNNVLGYF 478

Query: 478 IEVTHANADKV-----PDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALAREKWLYE 532
           IE T  +ADK+      D +  RQT  NA R+ T EL   E + L+A  RALA EK ++E
Sbjct: 479 IETTATHADKMLSPPLSDRFIHRQTTANAVRFTTVELSEMETRILNAGGRALALEKSIFE 538

Query: 533 QVLDQLQPVVPQLQAVARALAQLDMLASFADTAVARNWCRPEFTDRPGLWLEAGRHPVVE 592
           ++   +     +L   ARALA+LD++ + A  A   +WC P+  D     +  GRHPVVE
Sbjct: 539 ELRQAVIVAAAELSDCARALAELDVVTALAVLARDEDWCAPKVDDSRAFEISGGRHPVVE 598

Query: 593 NELQAQGDTFIPNDLDLGESEDAERRLLLITGPNMGGKSTYMRQTALIALLAHVGCYVPA 652
             L+A G  FI ND DL E       + L+TGPNM GKST++RQ ALIA+LA +G YVPA
Sbjct: 599 AALRASGTPFIRNDCDLSEGAAP---IWLLTGPNMAGKSTFLRQNALIAILAQMGSYVPA 655

Query: 653 KAARLGPMDQIFTRIGASDDLASGRSTFMVEMTESAAILHNATEQSLVLMDEVGRGTSTF 712
            AAR+G + Q+F+R+GASDDLA GRSTFMVEM E+AAIL+ A +++LV++DE+GRGT+T+
Sbjct: 656 TAARIGLVAQVFSRVGASDDLARGRSTFMVEMVETAAILNQAGDRALVILDEIGRGTATY 715

Query: 713 DGMALAMAILRHLLEKNRSLTLFATHYFELTRLAHEYPALVNVHLDAVEHGDRIVFLHAV 772
           DG+++A A L HL   NR   LFATHY E+T LA +   + N  +   EH   ++FLH V
Sbjct: 716 DGLSIAWATLEHLHGVNRCRALFATHYHEMTGLAAQLSGVENATVAVKEHDGDVIFLHEV 775

Query: 773 EEGPANQSYGIQVAALAGIPSAVVRAAKKELRQLET--RAAVDP---LQPDL-FAAVPAP 826
             G A++SYG+QVA LAG+P +VV  A++ L+ LE+  R+  +P   L  DL   A  AP
Sbjct: 776 RRGAADRSYGVQVAKLAGLPPSVVARAREVLKTLESGERSGGNPAKALLEDLPLFANAAP 835

Query: 827 DEGPEAPAHPALERLGEIDPDSLSPREALDLLYELKTL 864
              P AP      RL +I PD+LSPREALDL+YELK+L
Sbjct: 836 PPPPAAPTSALEARLADISPDALSPREALDLVYELKSL 873