Pairwise Alignments

Query, 1279 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  519 bits (1337), Expect = e-151
 Identities = 341/938 (36%), Positives = 521/938 (55%), Gaps = 48/938 (5%)

Query: 341  EPVEVQGSGEIRML-LQNFNLLQQHIAAQNETIRQERDHLEVLVE-ERTAELVGLA-KSL 397
            +P+ +   G + ML +Q ++ L Q +           D L V ++  + AE   LA + +
Sbjct: 419  QPIALLELGTVGMLTMQQYHWLSQML-----------DDLSVAIQLSQNAEQQRLAERKV 467

Query: 398  RDANQEQQAVFDAARIGII-LTRDRIIRRCNRTIEEILGYEPGEILEQSTRIWYPDEAT- 455
             + +Q  Q + DA    +  L+ D      N    +++G    E++++  +  +P E   
Sbjct: 468  LEQSQLNQEILDATPNPMYCLSADGKFLTVNAKFLDLMGLYNNEVIDKEPQEIFPAEVAE 527

Query: 456  -FLAVGERVREGLTRHGYFREELELVRKDG-SRFWGRIMAQVIDRNAPEKGMAGTVEDIG 513
             F A  + + +  +   Y   E+ LV   G  R      A   DR     G+ G + D+ 
Sbjct: 528  RFAAAHQVLTQQQSSQNY---EVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMT 584

Query: 514  EERRILAEMAQAKALAEAAAQAKADFLANMSHEIRTPMNAVIGMTHLALKTDLDERQREY 573
            E + +  E+ +AK  A+A +QAK DFLANMSHEIRTPMNA++GM HLAL T LD  QR+Y
Sbjct: 585  ERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKY 644

Query: 574  LRKIQHSSQHLLGIINDILDFSKSEAGKLHIEQIDFDLEKVLEDVSSLMSERATSKGLEF 633
            + +I  S+++LLGIINDILDFSK EAGKL++E+IDF+L+ VL++V++++S +A  KG+EF
Sbjct: 645  VTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEF 704

Query: 634  VIEMADEVPRHLVGDPLRIGQVLINYASNAVKFTERGEVAIHVGLEEDQGQEVLLRFAVH 693
            ++++   +P  L+GDPLR+GQV++N   NAVKFT +GE+ +   + +   Q+V LRFAV 
Sbjct: 705  LMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVK 764

Query: 694  DTGIGIKAGELPTLFNSFQQADSSTTRKYGGTGLGLVIAKRLAELMGGQVGAESEPGRGS 753
            DTGIGI   +L  LF++F QAD+S TR+YGGTGLGL I+K+L ELMGGQ+   SE G+GS
Sbjct: 765  DTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGS 824

Query: 754  TFWFTARLG-RSSNARHRAPPRPDLRTRRLLVVDDHDHARDVVCDMLRSMSFQVSDTDSG 812
            TF F+   G + +  R  + P   L  +R+LVVDD+D AR ++  +L +M F V    +G
Sbjct: 825  TFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNG 884

Query: 813  NRCLAELQRASAAGEPYDIVFLDWQMPEMDGLATAREIRRLELPQPPLVLMITAYGRDEL 872
               L+E+Q+     +P+D++F+DW MP M+G+     ++ L L       ++TAYGR E+
Sbjct: 885  FEALSEIQQ-----KPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGR-EI 938

Query: 873  ARSAGESGLQGIEEILIKPVSPSQLFNTVMRI--LDHEDGPHSAADPEALPDLAPLAGLR 930
                  S L  ++ +++KPV+PS L + ++    ++H     + A   + P+    AG  
Sbjct: 939  NLDGENSKL--VDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPN---FAGQS 993

Query: 931  VLLVEDNQLNQEVASEFLAGANMVVDVADDGASALEKVRQQRYDVILMDMQMPVMDGIAA 990
            +LLVEDN++NQEVA   L    + V VA+ G  ALE++    +D++LMDMQMPVMDGI A
Sbjct: 994  LLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITA 1053

Query: 991  TREIRRQFPAAVLPILAMTANAMEQDRERCLAAGMNDHIAKPVDPRDLLGKLLKWLAPGA 1050
            T  IR       LPI+AMTANAM  D ERCL AGMNDH++KP++  D   ++L+     +
Sbjct: 1054 TEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEV-DKFYQVLRHFLQVS 1112

Query: 1051 PLVAPQAAAPLPGTVTPTPPVAAPAKADRQPFAGIPGLDATLGLHQALDREGLYLRLMDK 1110
               +  + +P        P  + PA         + G+D    + +    +  Y  ++  
Sbjct: 1113 DEQSFSSHSP------NKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRH 1166

Query: 1111 FVSGQRDAPQRLARAIDAGDWVGAEREAHTLKGVSAQIGAMPLRDLAEGLEHAIRQRDPP 1170
            F+  Q D    +   I+A DW  A R AHTLKG +A +G   L  LA  +E ++ Q+  P
Sbjct: 1167 FIDSQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQQVLP 1226

Query: 1171 DLLQDLLGKIADSLPPLVDAIAAVLATQEVPAAKATVNWMQVEEVCARLAQQLANDDFAC 1230
                +LL +    L  + D ++A     + P     ++W     +  +  QQ  ND    
Sbjct: 1227 SF--ELLQQAQSLLTQVDDELSAWEHQHKEPLLAENLDW----GLWYQQLQQAINDYDVT 1280

Query: 1231 EKLLDEHEALLHGALGEDFPPLARAVRDFDFTQAQARL 1268
               L +    +          L  A+ DFDF QA+A L
Sbjct: 1281 ALSLSKSIRQVSQWDSAQQAALISAIEDFDFEQAKALL 1318