Pairwise Alignments

Query, 277 a.a., squalene synthase HpnD from Dechlorosoma suillum PS

Subject, 308 a.a., Phytoene/squalene synthetase from Pseudomonas stutzeri RCH2

 Score =  129 bits (324), Expect = 8e-35
 Identities = 86/271 (31%), Positives = 120/271 (44%), Gaps = 9/271 (3%)

Query: 5   DYCQQKAAASGSSFTISFTLLPREKKQAMTALYAFCREVDDVVDE--------VEDPQVA 56
           D+  Q       SF  +  L     +Q+   LYA+CR  DDV+D           D    
Sbjct: 7   DHSTQAINVGSKSFAAAAKLFDERTRQSAVMLYAWCRHCDDVIDGQTLGHGQLAGDRNSG 66

Query: 57  AIKLAWWRQEVERLYDGTPQH-PVAQALAEVIKTIPLDKELLLEIIDGMEMDLTQARYAD 115
             +LA      ER Y G     P   A  +V++   + K   LE + G  MD+   RY  
Sbjct: 67  EARLAELVDLTERAYAGEAMSDPAFAAFQQVVQRHQIPKRYPLEHLAGFRMDVQNYRYQT 126

Query: 116 FKSLQLYCYRVASVVGLLSAEIFGMTQRATRKYAHDLGMAFQLTNIIRDVGEDARRGRIY 175
                LYCYRVA VVGL+ A + G     T + A DLG+AFQLTNI RD+ EDA+ GR+Y
Sbjct: 127 LDDTLLYCYRVAGVVGLMMARVMGAEAEPTLERACDLGLAFQLTNIARDIVEDAQIGRVY 186

Query: 176 LPMDELQRFNVPAADILNSRPTEAFAALMQFQIERARGFYEQAFAALPAADRRQQKPGLV 235
           LP + L   ++P  ++   +   A A L    +  A  +Y+ A   L     R       
Sbjct: 187 LPAEWLAEVDIPEDEVALLQHRAALATLAVRLVNLAEPYYQSASQGLRDLPLRSAWSIAT 246

Query: 236 MAAIYRSLLEEIAAEPELVLTHRISIPPGRK 266
              +YR +  E+ A        R+S   G+K
Sbjct: 247 AHGVYRQIGVEVKARGAAAWDRRVSTSKGQK 277