Pairwise Alignments

Query, 261 a.a., DNA-binding domain-containing protein, AraC-type from Dechlorosoma suillum PS

Subject, 262 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  143 bits (361), Expect = 3e-39
 Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 3/225 (1%)

Query: 40  HSHDWAQLAYPIAGTIRLATADMAWIVPPLRAIWIPPQVAHTVVMLGQVELRTLYVDAAA 99
           H H  AQL Y  +G + L+  +  WI+ P +A+W+P ++ H +   GQV LR++Y    A
Sbjct: 36  HWHHAAQLIYAESGVMELSCEESFWIISPQQALWMPAELPHRLKARGQVSLRSVYFQPDA 95

Query: 100 APLPLDSC-RVVEISDVMRALSEALAASPAPAEP--RRGLMTALLVEEMRQAKPLSLGLP 156
            P       + + +S ++R L ++     + ++P  R   +  LL+ E+  A+ + L LP
Sbjct: 96  LPERFSKQPQSLVVSPLLRELMKSAMPVTSSSQPSSREVHLMQLLMSEIGWAQEIPLKLP 155

Query: 157 LPRDRRLMALCQALLDQPAADLSLEAWAARVGASSRTLARLFQKELAMPFGAWRQQLRLS 216
           +P+D RL  +C  LL  P  D +L  W   VGAS RTL+RLFQ +L   F  WRQQ R+ 
Sbjct: 156 MPKDNRLQKICLGLLADPGNDCTLSQWGEIVGASPRTLSRLFQTQLGTSFAIWRQQARIF 215

Query: 217 RAAALVAQGRSLGAVAAELGYASPSAFSAMFKRAFGQSPRQFFRQ 261
            A   +  G  +  VA E+GY S  AF++ FK+  G +P +F  Q
Sbjct: 216 AAIPRLNLGEPIVRVAMEMGYDSAGAFASAFKKMMGVTPSEFRTQ 260