Pairwise Alignments

Query, 792 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 527 a.a., signal transduction histidine-protein kinase/phosphatase UhpB from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (258), Expect = 2e-26
 Identities = 76/242 (31%), Positives = 128/242 (52%), Gaps = 15/242 (6%)

Query: 556 KQADAELMRSRDQLRALNEGLQRVREEERSRISLEIHDQLGQSLTVLKLEMAWLRARLLG 615
           ++ +  L +   + + L   L  V E+ R  ++ E+HD++GQ++T ++++   + A  L 
Sbjct: 292 QKMNTRLAKELREKQDLARQLVSVEEQIRKSVARELHDEIGQNITAIQIQS--MLAERLA 349

Query: 616 GQAEEKTRLQEVGRLIDDTLRAVRTISWDLRPGILDTLGLGAGVEWLVDDFR---RRLGI 672
              + K     V  L     ++ R +   LRP ILD LGL   +  LV + R   + + +
Sbjct: 350 SNDQAKQAASSVQSLAMRIHQSTRQLLKQLRPHILDELGLEHAIRQLVQEMRFAEQGMTV 409

Query: 673 RCNVVVPRERLELPDVLATHLFRICQELLTNVARHAQANRIDVSLGLADGRVLLEVRDNG 732
           R N+ V  ++L+  D     L+RI QELL N+ +HA+A R+ +SL      ++LEV+D+G
Sbjct: 410 RLNMGVNPQKLD--DTTRVTLYRIVQELLNNICKHAKATRVHISL-FPGSEMVLEVKDDG 466

Query: 733 RGMPM-LPAHGHSLGLLGIKERAAQCGGEVHIATRPEIEGTRVRVLVPL---ITRETDIG 788
            G+P      GH  GL G+ ER +  GG++ + +     GTR+ V +P    IT E  +G
Sbjct: 467 IGLPTDWRVRGH--GLKGLSERVSALGGQLKMTSSTFQTGTRIIVNLPTKRSITSE-KLG 523

Query: 789 NI 790
           NI
Sbjct: 524 NI 525