Pairwise Alignments

Query, 650 a.a., DNA helicase, Rad3 from Dechlorosoma suillum PS

Subject, 686 a.a., DinG family ATP-dependent helicase YoaA from Acidovorax sp. GW101-3H11

 Score =  472 bits (1214), Expect = e-137
 Identities = 280/660 (42%), Positives = 381/660 (57%), Gaps = 35/660 (5%)

Query: 7   LVADTAAVFEPGGPLSANIPGYRTRSQQVEMAEKIAAAIADNRMLVAEAGTGTGKTYAYL 66
           LV   A VF  GG L      ++ R  Q +MA  +A  I     LV EAGTG GKT++YL
Sbjct: 3   LVDMVAEVFAAGGVLERADTHFQPREGQTQMACAVARTIEAGGALVVEAGTGVGKTFSYL 62

Query: 67  VPALLSGGKVIVSTGTKTLQDQLFNKDIPTVRAALKAPVKVALLKGRANYVCPYHLDRSL 126
           VPALLSG +V++ST TK LQDQLF +D+P +   L  PV++ALLKGR++Y+C Y ++ + 
Sbjct: 63  VPALLSGERVLLSTATKALQDQLFARDLPWLVETLGMPVRMALLKGRSSYLCLYRMELAR 122

Query: 127 LDGRFQNREDVAYIQKIARFAKETRSGDKAECLDVPENATAWIMATSTRENCLGQECPHH 186
            D + Q+R     + K+  ++  T+SGD AE   + + +    + TSTRENCLG +C   
Sbjct: 123 QDAQAQDRGVARVLAKVEDWSHHTQSGDLAELTGLDDRSPVIPLVTSTRENCLGSQCAQF 182

Query: 187 KECFVLQARKEALSADVVVVNHHLFFADVMLKDEGMAELLPACNAVIFDEAHQLPETASL 246
           + C V +AR+EAL+AD+VV+NHHLFFADV +++ GMAELLP    V+FDEAHQ+ ET   
Sbjct: 183 RPCHVHRARREALAADIVVINHHLFFADVAVRESGMAELLPTVRVVVFDEAHQINETGVQ 242

Query: 247 FFGDSFSTSQVLDLARDARSEGLASARDCLDLQEATRIVDKAAKDLRL----TVAVEPAR 302
           F G   ST QV+D +RD  + GL  AR   D  E +R V+ +A+DLRL     +     R
Sbjct: 243 FLGTQLSTGQVMDFSRDLLAAGLQHARGLADWVELSRRVELSAQDLRLVARTALGATKLR 302

Query: 303 YAWGQLEG-NAQFLDG-LANLEKELELLNAILENQAERSEGLENCWRRNGELLQRLIQWR 360
           +A    EG  A+   G L  +          L+  +E +      + R  ELL RL ++ 
Sbjct: 303 WADDAPEGIPAEHWHGALRGVALACAQAQEALDTVSEIAPDFVRLYERGSELLARLARFS 362

Query: 361 -QEQPGVVRWGEAFNHSLQLNATPLDVARLFRKQLDGHP--------------------- 398
               P VVRW +     L+L  +PLD+A   R +L G P                     
Sbjct: 363 GPGDPEVVRWVDV-GTQLRLVESPLDIAEAMRTRLLGAPAEASEDAGGDGWPGDSPAGPG 421

Query: 399 RAWIFTSATLAVQADFSHYCNELGLWDAESARWESPFDYGQQAVLYAPRDIPDPNLPGFT 458
           RAW+FTSATL      S +    GL +AE  R  SPFDY  QA LY PR +P P  P  +
Sbjct: 422 RAWVFTSATLGDDERLSWFTERAGLQEAEILRVVSPFDYPAQAALYVPRHLPAPADPAHS 481

Query: 459 EAVVEAAWPALKACGGGAFFLCTSLRAMRRTHELLAAKLEDEGLEMPLLLQGEGSKTELL 518
            A+ +    A +  GG    L T+L+A+R   + L  +    G  + +L+QGE  K  L+
Sbjct: 482 LALAQWVGQAAEQLGGRTLVLTTTLKALRAVGDALQKRFASSG-ALEVLVQGEWPKRRLM 540

Query: 519 ERFRRLGN-----AVLVGSQSFWEGVDVRGEALSLVVIDKLPFAPPDDPVLKARVEQMEK 573
           ERFR   +      VLV S +FWEG DV G+AL LVVIDKLPF PP DP+++AR +++EK
Sbjct: 541 ERFREGADHGQPGCVLVASATFWEGFDVPGDALQLVVIDKLPFPPPGDPLVEARTQRIEK 600

Query: 574 EGRSAFMEYQLPRAVINVKQGAGRLIRDETDRGVLMICDPRLITKPYGKRVWRSLPPMKR 633
            G  AF  Y LP A + +KQGAGRLIR E+DRG+L++ D RL+T  YGKR+  +LPPM+R
Sbjct: 601 AGGKAFKAYALPEAAVALKQGAGRLIRRESDRGILVVGDTRLVTMGYGKRLLAALPPMRR 660