Pairwise Alignments

Query, 650 a.a., DNA helicase, Rad3 from Dechlorosoma suillum PS

Subject, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  518 bits (1335), Expect = e-151
 Identities = 291/636 (45%), Positives = 386/636 (60%), Gaps = 8/636 (1%)

Query: 15  FEPGGPLSANIPGYRTRSQQVEMAEKIAAAIADNRMLVAEAGTGTGKTYAYLVPALLSGG 74
           F   G L   IPG++ R  QV+MA+ +A+AIA+   LV EAGTGTGKT+AYLVPALLSG 
Sbjct: 6   FSQQGALGQAIPGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPALLSGK 65

Query: 75  KVIVSTGTKTLQDQLFNKDIPTVRAALKAPVKVALLKGRANYVCPYHLDRSLLDGRFQNR 134
           KVI+STG+K LQ+QLF++D+P + +AL    +VALLKGRANY+C   L R +++      
Sbjct: 66  KVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESHTPES 125

Query: 135 EDVAYIQ--KIARFAKETRSGDKAECLDVPENATAWIMATSTRENCLGQECPHHKECFVL 192
           +     Q  K+  +A  T+SGD  EC D+ E++      TST +NCLG+EC  +++CFV 
Sbjct: 126 DPTLLTQLVKVRSWASSTQSGDLGECDDLAEDSPIIPTITSTNDNCLGKECASYQDCFVS 185

Query: 193 QARKEALSADVVVVNHHLFFADVMLKDEGMAELLPACNAVIFDEAHQLPETASLFFGDSF 252
           +AR+ A+ ADVVVVNHHLF AD+ +K+ G  EL+P     IFDEAHQLP+ AS +FG S 
Sbjct: 186 KARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFIFDEAHQLPDIASQYFGQSV 245

Query: 253 STSQVLDLARDARSEGLASARDCLDLQEATRIVDKAAKDLRLTVAVEPARYAWGQLEGNA 312
           S+ QV DLA+D        A+D   LQ+ +  + +AA DLR+ +     R  W ++    
Sbjct: 246 SSRQVQDLAKDIELGYRTEAKDMRQLQKVSDKLVQAAMDLRIVLGEPGYRGNWREVLKVP 305

Query: 313 QFLDGLANLEKELELLNAILENQAERSEGLENCWRRNGELLQRLIQWRQEQ-PGVVRWGE 371
                +  L + L+    +L+    RS+ L+  + R   +L R+ +       G   W +
Sbjct: 306 TVAREVERLNEALQFALDVLKLALGRSQLLDTAFERATLILGRIRRVCDVSVTGYSYWYD 365

Query: 372 AFNHSLQLNATPLDVARLFRKQLDGHPRAWIFTSATLAVQADFSHYCNELGLWDAESARW 431
                  L+ TPL VA  FR+Q+     AWIFTSATLAV  DFSH+   LGL  +     
Sbjct: 366 TTPRHFSLHITPLSVADKFREQIALKEGAWIFTSATLAVNEDFSHFTERLGLTPSAQFSL 425

Query: 432 ESPFDYGQQAVLYAPRDIPDPNLPGFTEAVVEAAWPALKACGGGAFFLCTSLRAMRRTHE 491
            SPFDY QQAVL  PR +P+PN  G  E +V    P ++   G  FFLCTS   MR   E
Sbjct: 426 VSPFDYQQQAVLCVPRYLPEPNSSGLAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGE 485

Query: 492 LLAAKLEDEGLEMPLLLQGEGSKTELLERFRRLGNAVLVGSQSFWEGVDVRGEALSLVVI 551
                   E L +P+L+QGE SK + L  F  LGNA+LV + +FWEG+DVRG+ LS V+I
Sbjct: 486 RFR-----ERLTLPVLMQGETSKQKTLAEFMELGNALLVATGAFWEGIDVRGDTLSCVII 540

Query: 552 DKLPFAPPDDPVLKARVEQMEKEGRSAFMEYQLPRAVINVKQGAGRLIRDETDRGVLMIC 611
           DKLPF  PDDP+LKAR+E     G   F + QLP AVI +KQG GRLIRD+ D+G L+IC
Sbjct: 541 DKLPFTAPDDPLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGALIIC 600

Query: 612 DPRLITKPYGKRVWRSLPPMKRTRDLIEVLDFYAAL 647
           D RL+T+ YG     SLPP+ RTRDL  V  F   L
Sbjct: 601 DNRLVTRDYGGVFLASLPPIPRTRDLDVVTTFLQQL 636