Pairwise Alignments

Query, 650 a.a., DNA helicase, Rad3 from Dechlorosoma suillum PS

Subject, 713 a.a., ATP-dependent DNA helicase from Ralstonia solanacearum GMI1000

 Score =  734 bits (1894), Expect = 0.0
 Identities = 378/662 (57%), Positives = 474/662 (71%), Gaps = 23/662 (3%)

Query: 9   ADTAAVFEPGGPLSANIPGYRTRSQQVEMAEKIAAAIADNRMLVAEAGTGTGKTYAYLVP 68
           A+ A +F   G L+  I  YR R+ Q+ MA+ +A AI     L+ EAGTGTGKTYAYLVP
Sbjct: 33  AELATLFADDGTLAQGIESYRPRTSQLTMAQAVANAIEAADSLIVEAGTGTGKTYAYLVP 92

Query: 69  ALLSGGKVIVSTGTKTLQDQLFNKDIPTVRAALKAPVKVALLKGRANYVCPYHLDRSLLD 128
           A+L GGKVI+STGTK LQDQLF +DIPTVR AL APV VALLKGRANYVC YHL+R+  +
Sbjct: 93  AMLWGGKVILSTGTKNLQDQLFLRDIPTVRKALNAPVSVALLKGRANYVCHYHLERTSQN 152

Query: 129 GRFQNREDVAYIQKIARFAKETRSGDKAECLDVPENATAWIMATSTRENCLGQECPHHKE 188
           GR  +R+D A++++I RF K T++GDKAE   VPENA  W + TSTR+NCLG EC ++K+
Sbjct: 153 GRLSSRQDAAWLREINRFLKTTKTGDKAELSAVPENAPVWNLVTSTRDNCLGSECAYYKD 212

Query: 189 CFVLQARKEALSADVVVVNHHLFFADVMLKDEGMAELLPACNAVIFDEAHQLPETASLFF 248
           CFV++ARKEA  AD+VVVNHHLFFADVMLKD GMAELLPA N VIFDEAHQLPETA+LFF
Sbjct: 213 CFVMRARKEAQQADMVVVNHHLFFADVMLKDTGMAELLPAANTVIFDEAHQLPETATLFF 272

Query: 249 GDSFSTSQVLDLARDARSEGLASARDCLDLQEATRIVDKAAKDLRLTVAVEPARYAWGQL 308
           G++ ST+Q+L+LARD+ +EGL+ ARD +D       +++AA+DLRL    + AR +  Q+
Sbjct: 273 GETISTNQLLELARDSVAEGLSHARDAVDWVAIAAPLERAARDLRLVFRQDGARLSMKQI 332

Query: 309 EGNA----QFLDGLANLEKELELLNAILENQAERSEGLENCWRRNGELLQRLIQWRQEQP 364
           + +A     F + L  LE+ L      LE QAER+E +E C RR   L  +L  W   +P
Sbjct: 333 DSDAALSKPFYEVLPKLEQALSDFTGALEAQAERAETIEQCHRRAVALCDKLEAWAAPRP 392

Query: 365 GV-------------------VRWGEAFNHSLQLNATPLDVARLFRKQLDGHPRAWIFTS 405
                                VRW E F +++QL+ TPL +A +F +Q  G PRAWIFTS
Sbjct: 393 APAAKADGEAALEAEAPVDERVRWVEVFANAVQLHLTPLSIAPIFSRQRAGQPRAWIFTS 452

Query: 406 ATLAVQADFSHYCNELGLWDAESARWESPFDYGQQAVLYAPRDIPDPNLPGFTEAVVEAA 465
           ATL+V+ +F+HY  +LGL    S   +SPFDY  Q +LY PRD+P P+ P FT+AV++AA
Sbjct: 453 ATLSVRGNFTHYAAQLGLDRDRSMTLDSPFDYASQGLLYVPRDLPQPSDPRFTDAVLDAA 512

Query: 466 WPALKACGGGAFFLCTSLRAMRRTHELLAAKLEDEGLEMPLLLQGEGSKTELLERFRRLG 525
            P ++A GG  F LCT+LRA+ R  E L  +    G + PLL+QG+ S+TELLERFR LG
Sbjct: 513 LPMIEAAGGKTFVLCTTLRAVNRAAERLTDEFAQRGWDFPLLVQGQASRTELLERFRALG 572

Query: 526 NAVLVGSQSFWEGVDVRGEALSLVVIDKLPFAPPDDPVLKARVEQMEKEGRSAFMEYQLP 585
           NAVLVGSQSFWEGVDVRGEALSLVVIDKLPFAPPDDPVL AR+E +EK+G S F  +QLP
Sbjct: 573 NAVLVGSQSFWEGVDVRGEALSLVVIDKLPFAPPDDPVLSARMEALEKKGLSPFAVHQLP 632

Query: 586 RAVINVKQGAGRLIRDETDRGVLMICDPRLITKPYGKRVWRSLPPMKRTRDLIEVLDFYA 645
            AVI +KQGAGRLIR E+DRGVLMICDPRL+ K YG+++W+SLPP KRTR+      F  
Sbjct: 633 HAVITLKQGAGRLIRSESDRGVLMICDPRLVEKSYGRQIWQSLPPFKRTREADTAAGFLR 692

Query: 646 AL 647
           +L
Sbjct: 693 SL 694