Pairwise Alignments

Query, 650 a.a., DNA helicase, Rad3 from Dechlorosoma suillum PS

Subject, 714 a.a., ATP-dependent DNA helicase DinG from Pseudomonas aeruginosa PA14

 Score =  211 bits (538), Expect = 7e-59
 Identities = 198/696 (28%), Positives = 297/696 (42%), Gaps = 97/696 (13%)

Query: 26  PGYRTRSQQVEMAEKIAAAIADNR--------MLVAEAGTGTGKTYAYLVPALL----SG 73
           P Y  R    E+A+ + A   D          ++  EAGTGTGKT AY + A+     SG
Sbjct: 25  PRYGQRLMIAEVAKALGAIKEDEEGHREGEPAVVAVEAGTGTGKTVAYSLAAIACAKASG 84

Query: 74  GKVIVSTGTKTLQDQLFNKDIPTVRAALKAPVKVALLKGRANYVCPYHLDRSLLDGRFQN 133
            +++++T T  LQ+Q+ +KD+P +          AL KGR  Y+C   LD  L +G+ Q+
Sbjct: 85  KRLVIATATVALQEQIVHKDLPDLLRNSGLAFSFALAKGRGRYLCLSKLDVLLQEGQAQS 144

Query: 134 RE-----------DV------AYIQKIARFAKETRSGDKAECLDVPENATAWIMATSTRE 176
                        DV       + Q I R A     GD+    +  ++A  W   T+   
Sbjct: 145 ATAQLFADDGFNIDVDETSSKLFNQMIERLAGNRWDGDRDSWPEAIDDAH-WAQLTTDHS 203

Query: 177 NCLGQECPHHKECFVLQARKEALSADVVVVNHHLFFADVMLKDEGMAELLPACNAV--IF 234
            C  + CP+ ++C   +AR+     DV+V NH L  AD+ L   G   +LP       +F
Sbjct: 204 QCTNRHCPNFQQCAFYKAREGMTKVDVIVTNHDLVLADLAL---GGGAILPDPRETLYVF 260

Query: 235 DEAHQLPETASLFFGDSFSTSQVLD-LARDARSEGLASARDCL--DLQEATRIVDKAAKD 291
           DE H LP+ A   F          D L + A++     A+  L  DL      V + A++
Sbjct: 261 DEGHHLPDKAIGHFAHFTRLRATADWLEQIAKNLTKLLAQHPLPGDLGRLIEQVPELARE 320

Query: 292 LR------LTVAVEPARYAWGQ-LEGNAQ----FLDGLA-------------NLEKELEL 327
           ++       T   E   +  G+ +EG  +    F+ G+                 K  +L
Sbjct: 321 IKTQQQFMFTACEEIGDFRAGEDMEGRERPRHRFVGGVVPEHIREMGIELKKGFSKLTDL 380

Query: 328 LNAILENQAERSEG----------LENCWRRNGELLQRLI-QWR----------QEQPGV 366
              + +   E  +G           E  +   G LL R    W           Q+ P +
Sbjct: 381 FTRLTDILKEAMDGEGAGGIASHQAEEWYPLFGSLLARAQGNWELWTAFTCEDPQDSPPM 440

Query: 367 VRW----GEAFNHSLQLNATPLDVARLFRKQLDGHPRAWIFTSATLAVQADFSHYCNELG 422
            RW         + ++ NA+P+  A   R+ L       + TSATL     F  Y    G
Sbjct: 441 ARWLTLAESGSFYDIEANASPILAAETLRRNLWNVAYGVLVTSATLTALGTFDRYRMRAG 500

Query: 423 L-WDAESARWESPFDYGQQAVLYAPRDIPDPNLPGFTEAVVEAAWPALKACGGGAFFLCT 481
           L  +A +A   SPF + +  VL  P    DP       A +    P L     G+  L +
Sbjct: 501 LPRNAVTAVVPSPFHHAEAGVLRVPDLKADPRNAAEHTAAIIRELPELVKGARGSLVLFS 560

Query: 482 SLRAMRRTHELLAAKLEDEGLEMPLLLQGEGSKTELLERFRRL----GNAVLVGSQSFWE 537
           S + M+   + L     D      + +QG  SK E L + +       ++VL G  SF E
Sbjct: 561 SRKQMQEVFDGL-----DRDWRKRVFIQGNLSKQETLNKHKSRVDDGEDSVLFGLASFAE 615

Query: 538 GVDVRGEALSLVVIDKLPFAPPDDPVLKARVEQMEKEGRSAFMEYQLPRAVINVKQGAGR 597
           GVD+ G     VVI K+PFA PDDPV  A  E +E  G + FME  +P A + + Q  GR
Sbjct: 616 GVDLPGAYCEHVVIAKIPFAVPDDPVEAALAEWIEARGGNPFMEIAVPDASLRLVQACGR 675

Query: 598 LIRDETDRGVLMICDPRLITKPYGKRVWRSLPPMKR 633
           L+R E DRG + + D R++T+ YGK +  +LPP +R
Sbjct: 676 LLRTEQDRGTITLLDRRVVTQRYGKAILNALPPFRR 711