Pairwise Alignments

Query, 367 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

Subject, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (290), Expect = 2e-30
 Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 43  QQAENLEQERQSLGRVFGSLDAFGASLAGVSQSFVGLAGHLNQDKLSAAEAAGQALHNRE 102
           Q  +   Q+ Q L     +++   ++L+ VSQS        N  +  A  A  +A ++++
Sbjct: 323 QNMKMSSQQDQELEMAATAMEEMTSALSSVSQS-------TNMAEEYAGSAEKEANNSKQ 375

Query: 103 SFARIASNLTSLVEHLGHSSRRVEDLARRAGEIGGIVQLIKEIADQTNLLALNAAIEAAR 162
            F +       L      +S  ++ LA  +  +G ++ +IK IA+QTNLLALNAAIEAAR
Sbjct: 376 VFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAAR 435

Query: 163 AGEAGRGFAVVADEVRKLAERTTRATVDIGTLVTTIQTETGAAHDAMQAGAGNAARFAAD 222
           AGE GRGFAVVADEVR LA+RT  +T +I T+++ +Q +   +   ++  A        +
Sbjct: 436 AGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGN 495

Query: 223 SEAAMRSMEALQGLSAAMEASVDGAALLANVELANLEELSLKLEVYKVFLGISGLRPEQV 282
              A  S+ A+QG +  +       A     +L   +E+S  L   K   G   L  +Q+
Sbjct: 496 MGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQL 555



 Score = 27.7 bits (60), Expect = 8e-04
 Identities = 29/148 (19%), Positives = 62/148 (41%), Gaps = 15/148 (10%)

Query: 4   GKKQRRLAQLEQEVRQWAARDEQARAEI--------QRLEAEAGQWRQQAENLEQERQSL 55
           G++ R  A +  EVR  A R +++  EI        ++ E      R  A+ ++  R ++
Sbjct: 437 GEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNM 496

Query: 56  GRVFGSLDAFGASLAGVSQSFVGLAGHLNQDKLSAAEAAGQALHNRESFARIASNLTSLV 115
           G    SL A   S   + +    +A    +++L+ ++   +   N  +   ++  +   +
Sbjct: 497 GVANESLVAIQGSAKEIHKLNTSIAA-ATEEQLTVSD---EISSNLSTIKTLSGEMNLAI 552

Query: 116 EHLGHSSRRVEDLARRAGEIGGIVQLIK 143
           + LG     V DL R   ++   +  I+
Sbjct: 553 KQLGPV---VVDLQRNVDDLNSAIAHIR 577