Pairwise Alignments

Query, 367 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

Subject, 623 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  112 bits (280), Expect = 3e-29
 Identities = 61/155 (39%), Positives = 94/155 (60%)

Query: 79  LAGHLNQDKLSAAEAAGQALHNRESFARIASNLTSLVEHLGHSSRRVEDLARRAGEIGGI 138
           +A +      +A ++A  +   +E   +  S++ SL + +  ++  +EDL+R A  I  I
Sbjct: 397 IAANAENTATAAQQSAASSFQGKELVNKTRSSINSLADEVTQATEVIEDLSRHAQSISSI 456

Query: 139 VQLIKEIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAERTTRATVDIGTLVTTI 198
           +  I+ IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  +T ++   + T+
Sbjct: 457 LATIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSRRTQDSTQEVHATIETL 516

Query: 199 QTETGAAHDAMQAGAGNAARFAADSEAAMRSMEAL 233
           Q  T  A   M++    A     D+ AA++++E +
Sbjct: 517 QRTTAKAVSLMESSQMLAGNSVEDANAAVKALEEI 551



 Score = 26.9 bits (58), Expect = 0.002
 Identities = 33/172 (19%), Positives = 62/172 (36%), Gaps = 15/172 (8%)

Query: 26  QARAEIQRLEAEAGQWRQQAENLEQERQSLGRVFGSLD-------------AFGASLAGV 72
           + R+ I  L  E  Q  +  E+L +  QS+  +  ++              A  A+ AG 
Sbjct: 424 KTRSSINSLADEVTQATEVIEDLSRHAQSISSILATIQGIAEQTNLLALNAAIEAARAGE 483

Query: 73  S-QSFVGLAGHLNQDKLSAAEAAGQALHNRESFARIASNLTSLVEHLGH-SSRRVEDLAR 130
             + F  +A  +        ++  +     E+  R  +   SL+E     +   VED   
Sbjct: 484 QGRGFAVVADEVRVLSRRTQDSTQEVHATIETLQRTTAKAVSLMESSQMLAGNSVEDANA 543

Query: 131 RAGEIGGIVQLIKEIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAE 182
               +  I Q +  I+D    +A  A  +    GE  +    + D   ++ E
Sbjct: 544 AVKALEEITQAVNVISDMAGQIATAAEEQTQVTGEITQNTVAIKDVTDEITE 595