Pairwise Alignments

Query, 287 a.a., ABC-type branched-chain amino acid transport system, permease component from Dechlorosoma suillum PS

Subject, 418 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N1B4

 Score =  167 bits (422), Expect = 5e-46
 Identities = 103/290 (35%), Positives = 164/290 (56%), Gaps = 35/290 (12%)

Query: 20  VHALLALSIWLTLS-CGLLSLANAAFMGVGAYVSALLTLHLEWSFGSVLLAGGIAPTLVA 78
           ++ +L L + + +   GLL L    F  VGAY  ALL+ +   SF   L   G+      
Sbjct: 122 IYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYSYALLSHYYGLSFWICLPIAGMMAATFG 181

Query: 79  LIIGAPVLRLSGVYLAMATLAFGEVVRITVLNL-EITGGPEGLNGIP-----------LA 126
            ++G PVLRL G YLA+ TL FGE++R+ + NL ++TGGP G++ IP            A
Sbjct: 182 FLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRNLTDLTGGPNGISNIPKPTLFGLSFDRTA 241

Query: 127 TEG---------------------WHIALILAV-AVYGLARLRRSKVGRAFEAIKEDEVA 164
            EG                     + IA++L++ A++ + RL R  +GRA+EA++EDE+A
Sbjct: 242 AEGLQTFHEYFGLEYNSINKVIFLYLIAVLLSLFALFVINRLLRMPLGRAWEALREDEIA 301

Query: 165 ARLMGINVDRYKLLAFSLGAFIAGVAGALNAHFTFFISPREYGFENAVDILTMAVLGGTS 224
            R +G+N    KL AF+LGA  AG AG+  A     ++P  + F  +  IL + VLGG  
Sbjct: 302 CRALGLNPTVIKLSAFTLGACFAGFAGSFFAARQGLVTPESFTFIESATILAIVVLGGMG 361

Query: 225 SLIGPMLGSSILTLLPELLRSLQDFRSLVNGAVLVLVVLFLPKGLWESRR 274
           S +G +L ++++ LLPE++R   ++R L+ GA++VL++++ P+GL   +R
Sbjct: 362 SQLGVVLAATVMILLPEMMREFSEYRMLMFGALMVLMMIWRPQGLLPMQR 411