Pairwise Alignments

Query, 237 a.a., ABC-type branched-chain amino acid transport systems, ATPase component from Dechlorosoma suillum PS

Subject, 272 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  231 bits (589), Expect = 1e-65
 Identities = 130/241 (53%), Positives = 173/241 (71%), Gaps = 9/241 (3%)

Query: 4   LLRVHDLAVAYGH-IEAVKGLDFHLNEGEITALVGANGAGKSTTLLALSGLIKP-----T 57
           LL ++++ V Y   I+ ++G+   + +GEI  L+G NGAGKSTTL A+SGL+K      +
Sbjct: 13  LLAINNIEVVYDDVIQVLRGVSIEVPQGEIVTLLGPNGAGKSTTLKAISGLLKTENGEVS 72

Query: 58  RGKIEFQGEDISRLPAHQIVERGLVQVAEGRAILTTLTVEENLQLGAYTRQDKEGIPASM 117
           RG I F GE I    A  +V  GL QV EGR I+  +TV ENL+LGAYTR+D + +   +
Sbjct: 73  RGDIHFMGERIDVKNADDVVRSGLFQVMEGRRIVEDMTVIENLKLGAYTRRDGQ-VNQDI 131

Query: 118 EEVYQLFPRLKERSQQFAGNLSGGEQQMLAIGRALMAKPKLLLLDEPSMGLAPIVVQEIF 177
           E V+  FPRLKER+   AG LSGGEQQMLAIGRALMA+PK++ LDEPSMGL+P++V+E+F
Sbjct: 132 EMVFNYFPRLKERTG-LAGYLSGGEQQMLAIGRALMARPKMICLDEPSMGLSPLLVKEVF 190

Query: 178 RILVEINR-RGLTILLVEQNVRQALKIAKHGYVIETGKIVLADSGANLLANPKVEEAYLG 236
            I+ +INR +G+T+LLVEQN   ALK A +GY++E+GKIVL  + A LL N  V+E YLG
Sbjct: 191 GIIEKINREQGITMLLVEQNANYALKAANYGYIMESGKIVLDGTKAQLLNNEDVKEFYLG 250

Query: 237 G 237
           G
Sbjct: 251 G 251