Pairwise Alignments

Query, 195 a.a., tetratricopeptide repeat protein from Dechlorosoma suillum PS

Subject, 363 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 66.6 bits (161), Expect = 5e-16
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 1/150 (0%)

Query: 23  AAYAAYQEAFRHTPGAATA-ACLGYLAARLERLEDAEAWYASAASLAPERGEHHFNLGYV 81
           A  AAY    RH P   T     G L  RL R  +A A Y  A  + P+R E   N   V
Sbjct: 14  ALLAAYDFRLRHEPRNCTLWNNRGILLERLNRWTEALASYNCALEITPQRQEALNNRAIV 73

Query: 82  RDRLGRPRQAIAAFHAALHLNPQLDRAWYGKGLAHATLGEHEAAATALEKAVELQPMNGI 141
            + LGR  +A+ ++  AL ++ Q    W  +G+    LG  E A  + ++A+ L      
Sbjct: 74  LEHLGRLPEAVESYEQALAIDRQQPEVWNNRGIVLRKLGRLEDAIASYQQAIALAAHYAQ 133

Query: 142 AYYHLGMAYHHAGRHQESERIARRLAAFEP 171
           A+ + G A    GR++E+ R   +  A +P
Sbjct: 134 AWANCGFALWQQGRYREAVRHYEQSVAIDP 163



 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 16/179 (8%)

Query: 14  LLHFLGRDGAAYAAYQEAF---RHTPGAATAACLGYLAARLERLEDAEAWYASAASLAPE 70
           +L  LGR   A  +Y++A    R  P        G +  +L RLEDA A Y  A +LA  
Sbjct: 73  VLEHLGRLPEAVESYEQALAIDRQQPEVWNNR--GIVLRKLGRLEDAIASYQQAIALAAH 130

Query: 71  RGEHHFNLGYVRDRLGRPRQAIAAFHAALHLNPQLDRAWYGKGLAHATLGEHEAAATALE 130
             +   N G+   + GR R+A+  +  ++ ++P    AW   G  + ++ + + A   L+
Sbjct: 131 YAQAWANCGFALWQQGRYREAVRHYEQSVAIDPDQSSAWRQLGQIYLSVDQPDQALRCLD 190

Query: 131 KAVELQPMNGIAYYHLGMAYHHAGRHQESERIARRLAAFEPRLARQLMRDGEHPQLLSL 189
           +A+ LQP    A+   G A ++ G++      A  L ++E     +L+  G+ P LLS+
Sbjct: 191 QAIALQPQQATAWTWRGHALYNLGQY------AAALTSYE---NAELL--GDRPLLLSI 238



 Score = 55.8 bits (133), Expect = 9e-13
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 9/137 (6%)

Query: 6   WSYRLHGWLLHFLGRDGAAYAAYQEA-FRHTPGAATAACLGYLAARLERLEDAEAWYASA 64
           W++R H   L+ LG+  AA  +Y+ A          +   G+  A+LER E+A A YA  
Sbjct: 203 WTWRGHA--LYNLGQYAAALTSYENAELLGDRPLLLSIQRGHTLAQLERYEEALASYA-- 258

Query: 65  ASLAPERGEHHFNLGYVRDRLGRPRQ----AIAAFHAALHLNPQLDRAWYGKGLAHATLG 120
           A L    GE    + Y +  +    Q    A+AAF  A+  NP L  AWY +   HA L 
Sbjct: 259 AILPQLTGEAAAEVAYYQGLVWAYLQDWTAALAAFDQAIAGNPDLAEAWYNRAALHARLD 318

Query: 121 EHEAAATALEKAVELQP 137
           +  AA   L++A+ L P
Sbjct: 319 QPVAAIADLQQAIALDP 335



 Score = 34.3 bits (77), Expect = 3e-06
 Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 21/156 (13%)

Query: 44  LGYLAARLERLEDAEAWYASAASLAPERGEHHFNLGYVRDRLGRPRQAIAAFHAALHLNP 103
           LG  AA L   E+AE        L+ +RG       +   +L R  +A+A++ A L   P
Sbjct: 213 LGQYAAALTSYENAELLGDRPLLLSIQRG-------HTLAQLERYEEALASYAAIL---P 262

Query: 104 QLD-----RAWYGKGLAHATLGEHEAAATALEKAVELQPMNGIAYYHLGMAYHHAGRHQE 158
           QL         Y +GL  A L +  AA  A ++A+   P    A+Y+   A  HA   Q 
Sbjct: 263 QLTGEAAAEVAYYQGLVWAYLQDWTAALAAFDQAIAGNPDLAEAWYN--RAALHARLDQP 320

Query: 159 SERIA--RRLAAFEPRLARQLMRDGEHPQLLSLVAH 192
              IA  ++  A +P   R L    E P   +L AH
Sbjct: 321 VAAIADLQQAIALDPDTYRSLA--AEDPDYQTLHAH 354



 Score = 32.7 bits (73), Expect = 8e-06
 Identities = 28/100 (28%), Positives = 42/100 (42%)

Query: 23  AAYAAYQEAFRHTPGAATAACLGYLAARLERLEDAEAWYASAASLAPERGEHHFNLGYVR 82
           A+YAA          A  A   G + A L+    A A +  A +  P+  E  +N   + 
Sbjct: 255 ASYAAILPQLTGEAAAEVAYYQGLVWAYLQDWTAALAAFDQAIAGNPDLAEAWYNRAALH 314

Query: 83  DRLGRPRQAIAAFHAALHLNPQLDRAWYGKGLAHATLGEH 122
            RL +P  AIA    A+ L+P   R+   +   + TL  H
Sbjct: 315 ARLDQPVAAIADLQQAIALDPDTYRSLAAEDPDYQTLHAH 354