Pairwise Alignments

Query, 493 a.a., replicative DNA helicase from Dechlorosoma suillum PS

Subject, 517 a.a., DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  333 bits (854), Expect = 9e-96
 Identities = 188/473 (39%), Positives = 296/473 (62%), Gaps = 16/473 (3%)

Query: 17  MNKPRRFSRSDPSDSPIDPALAQLRVPPNSLEAEQSLLGGLLLDNQAWDKVGDMVAEGDF 76
           M + RR SR+  S + + P     R+ P + E E+++LG L+++  A+  V +++    F
Sbjct: 1   MAEQRRNSRNTKS-TKVQPVNDYGRIQPQAPELEEAVLGALMIEKDAYSLVSEILRPESF 59

Query: 77  YRDEHRRIFRQIQRLLSLGKPADVVTVSEALDAAGETEHTGGLAYLGELAANTPSASNIR 136
           Y   H+ I+  I  L    KP D++TV E L   GE E  GG  Y+ +L++   S+++I 
Sbjct: 60  YEHRHQLIYAAITDLAVNQKPVDILTVKEQLSKRGELEEVGGPFYITQLSSKVASSAHIE 119

Query: 137 RYAEIVRERAILRQLVTAGDEIASSALNPLGRDAKTLLDEAETRVFEIAEKGAHSQQGFV 196
            +A I+ ++++ R+L+T    I S A +    D   L+ EAE ++FEI+++  + ++ + 
Sbjct: 120 YHARIIAQKSLARELITFTSNIQSKAFDET-LDVDDLMQEAEGKLFEISQQ--NMKKDYT 176

Query: 197 HINPLLNEVVQKIEELHDRDNPSDVTGVPTGFIDLDSKTSGLQPGDLIIVAGRPSMGKTA 256
            INP+++E  + I++   R +   ++G+ +GF  LD  TSG Q  DLII+A RP+MGKTA
Sbjct: 177 QINPVIDEAYKLIQKAAARTD--GLSGLESGFTKLDKMTSGWQNSDLIIIAARPAMGKTA 234

Query: 257 FALNIAEYVAVEQGLPVGVFSMEMGGAQLAMRMVASLGRLDSHRLRTGRLNDEEWSRLSM 316
           F L++A+ +AV+   PV +FS+EM   QL  R++ ++  + S ++++G+L   EW +L  
Sbjct: 235 FVLSMAKNIAVDYRNPVALFSLEMSNVQLVNRLITNVCEIPSEKIKSGQLASYEWQQLDY 294

Query: 317 ALGKMHEKPLYIDETGGLNPLDLRARARRLARQYGGKLGLIVIDYLQLMVSAKAGGGENR 376
            L  + + PLY+D+T  L+  +LR +ARRL R++G  + +I+IDYLQLM ++    G +R
Sbjct: 295 KLKDLLDAPLYVDDTPSLSVFELRTKARRLVREHG--VRIIIIDYLQLMNASGMAFG-SR 351

Query: 377 ATEVSEISRALKSLAKELSVPVIALSQLSRKVEER---TDKRPMMSDLRESGAIEQDADV 433
             EVS ISR+LK LAKEL++P+IALSQL+R VE R     KRP +SDLRESGAIEQDAD+
Sbjct: 352 QEEVSTISRSLKGLAKELNIPIIALSQLNRGVESREGIDGKRPQLSDLRESGAIEQDADM 411

Query: 434 IMMMYRDDYY----NKEKSQYPGQAEVIIGKQRNGPTGTVHLTFLGEYTRFEN 482
           +  ++R +YY    +   +   G AE++I K RNG  G V L F GE+TRF N
Sbjct: 412 VCFIHRPEYYKIYQDDRGNDLRGMAEIVIAKHRNGAVGEVLLRFKGEFTRFSN 464