Pairwise Alignments

Query, 431 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Dechlorosoma suillum PS

Subject, 415 a.a., RNA methyltransferase from Sinorhizobium meliloti 1021

 Score =  142 bits (358), Expect = 2e-38
 Identities = 134/441 (30%), Positives = 190/441 (43%), Gaps = 49/441 (11%)

Query: 6   IESLDHDARGVTRLEGKTVFVEGALPGETVEYALFREKPNYAVGEVSAVLRPSCARVPPR 65
           I+ L     GV R E   VF    LPGETV  A+     N A G + ++   S  RV P 
Sbjct: 8   IDRLGAQGDGVARTEAGPVFAPFTLPGETVSLAV-----NKANGTLISLKEASPERVEPP 62

Query: 66  CPHFG------TCGGCSMQHLEPTAQVAAKQRLLENNLWHLARLKPEQVYNPIYGPTWGY 119
           C HFG      TCGGC++QH       A K+ L+ + L     L PE     I  P  G 
Sbjct: 63  CRHFGPDGVNGTCGGCTLQHASDALYHAFKRNLVIDAL-RSKGLTPEVGALIIARP--GD 119

Query: 120 RHRARLTVRMVESKGMLVGFHEKRSSYVADLHTCPILPAHVSDLLVPLRQLFVRLSIRD- 178
           R RA  T R  E K +L+G+++ +S ++  +  CPI    +   L  +R++   ++    
Sbjct: 120 RRRAAFTARRTE-KELLLGYNQMQSHHIVSIGECPITSPGIVSRLATIRKIAAAMASSAE 178

Query: 179 --RLPQVEIAVGEKCTVMVLRILEPLSGADEKLLRAFADEHGIV-------FFLQPKGPA 229
             R+  +E   G       L++ +P        + A   E GI          ++P  PA
Sbjct: 179 PFRITVLETDTGLDLAFEGLKLSDPQR---RSAVDAVLGERGIARVSLNGEIVVEPLKPA 235

Query: 230 SAYRFHPVDGPDLSYLLPEFGLEMRFSPTEFTQVNPGINQMLIRRAMRLLDPQPGERIAD 289
             +    V  P                P  FTQ        + +  + L      +R+AD
Sbjct: 236 IDFDGVTVSPP----------------PGAFTQATRPAEDAMAK--LVLAHVGKAKRVAD 277

Query: 290 LFCGLGNFTLPIARSGARVVGVEGLKELTRRAEENAAANGLAANVSFGVANLFECTPKSL 349
           LF G+G F L IAR+ ARV  VEG     +  +  A        V+    +LF   P   
Sbjct: 278 LFAGIGTFALRIART-ARVHAVEGDDRAVKALDFAARNTQGLKPVTAEKRDLFR-RPMMA 335

Query: 350 GALGHFDKMLIDPPREGAVEVVKALGEDSPGRIVYVSCNPSTLARDAAILVHQKGYRFSG 409
             L  FD ++ DPPR GA      L      +I  VSCNP TLARD +IL    GYR +G
Sbjct: 336 QELKAFDAVVFDPPRAGAETQCHELARSGVKKIAAVSCNPVTLARDLSILT-AAGYRITG 394

Query: 410 AGIVNMFPHTSHVESIALFEK 430
              ++ F  ++HVE++A  EK
Sbjct: 395 VTPIDQFLWSAHVETVATLEK 415