Pairwise Alignments

Query, 500 a.a., efflux transporter, outer membrane factor lipoprotein, NodT family from Dechlorosoma suillum PS

Subject, 486 a.a., RND efflux system, outer membrane lipoprotein, NodT family from Pseudomonas fluorescens FW300-N1B4

 Score =  272 bits (696), Expect = 2e-77
 Identities = 178/476 (37%), Positives = 256/476 (53%), Gaps = 11/476 (2%)

Query: 16  LVATLTLLALAGCAVGPDYKRPEATLPEAYVATAEAAPAA---QAPVEKEWWKLFQDATL 72
           L   +    L+GC++ PDY++PEA +   Y      +PA    QA  E+ W + F D  L
Sbjct: 6   LSIAVAAFVLSGCSLIPDYQQPEAPVAGQYPQGPAYSPAQAPNQAAAEQGWKQFFHDPAL 65

Query: 73  NDLVRQAQEHNHDLLLAVAQVEEAEGVAREAGAAFFPQIDANASGGRNEISMKTDPLPAA 132
             L++ A E+N DL +A   ++      R   A  FP + A  SG R  +  +      A
Sbjct: 66  QQLIQTALENNRDLRVAALNIDAYAAQYRIQRADLFPAVSATGSGSRQRVPARASQTGEA 125

Query: 133 NTQRLRDSRKASLSTS-FEIDVWGKLRRANEAARAQLLSSRYARDTVELSVASLVTNAYL 191
               +  S  A++  S +E+D++G++R  +E A  +  ++  AR + ++S+ + V NAYL
Sbjct: 126 ---AISSSYSATVGISAYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANAYL 182

Query: 192 TLRAADADLALTRDTVATREKALDIVKSKQEAGSASPLDLHQAESTLATAQAQAASLRRQ 251
           T +A    L LT++T+   E++  +     E G AS LDL Q+ +++  A+AQ A   RQ
Sbjct: 183 TWQADKELLKLTQETLGAFEESYKLTSRSNEVGVASALDLAQSRTSVENARAQLAKYTRQ 242

Query: 252 RAVAETQLALL--TGKPDLKIAAGDLRQLPLPPVPPAGLPSSLLEARPDIRQAEETLVAA 309
            A  E  L LL  TG P    AA  L    L  VP AGLPS LL+ RPDI QAE  L AA
Sbjct: 243 VAQDENSLVLLLGTGIPANLQAAKPLSDDVLSEVP-AGLPSDLLQRRPDILQAEYNLKAA 301

Query: 310 NAKIGVAKAALYPSLSLTGSLGSESAALTNLFTSAAGAWSLGLAATMPIFDFGRNAARID 369
           NA IG A+AA +PS+SLT + GS S  L+ LF   +G W       +PIF+ G   A +D
Sbjct: 302 NANIGAARAAFFPSISLTANAGSLSPDLSGLFKGGSGTWLFQPQINLPIFNAGSLRASLD 361

Query: 370 QATAKQKQALISYQKTVQTAFKEVNDALVGLRENGEGERAQEKRVQATQKTLELAQLRYE 429
            +  ++   + +Y+K++QTAF+EV D L   +   E  +AQ   V A Q    LA+ RY 
Sbjct: 362 YSKIQKDIGVANYEKSIQTAFQEVADGLAARQTYTEQLQAQRDFVSANQDYYRLAERRYR 421

Query: 430 AGYSAFLEVLDAQRSANDALLDYVSTRQARLTSAVDLFKALGGGWKDD-FKAESLK 484
            G  + L  LDAQR    A    ++ R A+LTSAV+L+KALGGGW +   K E LK
Sbjct: 422 IGVDSNLTFLDAQRQLFSAQQALITDRLAQLTSAVNLYKALGGGWNEQTAKNEPLK 477