Pairwise Alignments

Query, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 917 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  300 bits (769), Expect = 2e-85
 Identities = 234/660 (35%), Positives = 331/660 (50%), Gaps = 48/660 (7%)

Query: 400  LRAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMTELALDTELTEEQRDYLEAVQMSAN 459
            L  KEA E A+R KS+FLANMSHEIRTP+NG++G T+L   ++LT  Q+DYL  ++ SA+
Sbjct: 272  LARKEALE-ASRIKSEFLANMSHEIRTPLNGILGFTQLLQKSDLTPRQQDYLGTIEKSAD 330

Query: 460  ALLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQKGLELLARRGPGVP 519
            +LL II++ILDFSKIEAG+L ++ IPF+L  +  D L  +A  A  K LEL++      P
Sbjct: 331  SLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIEDTLTILAPAAHTKQLELVSLVYRDTP 390

Query: 520  RRLLGDPGRLRQILLNLLGNAIKFTERGEIEVAVELAEPGAAGQVLYFCVSDTGIGIAPE 579
              L+GDP RL+Q+L NL+ NAIKFT  G I V   + +  A    L   V DTGIG+  +
Sbjct: 391  LSLVGDPLRLKQVLTNLISNAIKFTNEGTIAVRAMVEDDNADRAQLRISVQDTGIGLTDQ 450

Query: 580  KQEHIFEAFAQEDSSTTRRFGGTGLGLTICSRLCELMGGRIWVDSVPGQGSAFHFTLQLP 639
                +F+AF+Q D+S +R+ GGTGLGL I  RL E MGG I VDS+P +GS F  +L LP
Sbjct: 451  DLRALFQAFSQADNSMSRQPGGTGLGLVISKRLIEQMGGEIGVDSIPDEGSEFWISLSLP 510

Query: 640  TDGAAAPE-PERRLSGKPALLLVVANARQRCRLQGLLASWGATVVAAASGAEGLALLEQG 698
                   + P   L G+  + L+  +   R  LQ  L S G  V    +  +  A +   
Sbjct: 511  KARDDVEDLPHPALQGR-RIALLEQHPLARQALQHQLESLGLEVHTFDTLDQMQAAIGAQ 569

Query: 699  QWDGVVADSRPVDGDAGDLL-EHLARSPGRVPLLMLLSPSRMRQEIARCKALGVGHY--- 754
            +    + D   +   A ++  E L+R    +  L         + +  C     GHY   
Sbjct: 570  RQSSQLIDLAVLGVTAREIQPEALSRRLMEIEALGC-------KCVVLCPTTEQGHYHDT 622

Query: 755  ----------LGKPALADELWRSLQALLEPAVAGVPATVAEAAGTPPAGLEVLLAEDHPV 804
                       GKPA   +L R L  L+ P         A  A  P     VL  +D+P 
Sbjct: 623  LPEVHSYTQLQGKPACTRKLQRVLVELVRPN----QTYAAPVAAAPSRAARVLCVDDNPA 678

Query: 805  NQQLMRNMLERMGHRVTLARHGGEAVAAAARRRFDLVLMDMQMPEMGGEQATRLIRADEQ 864
            N  L++ +L  MG  V    +G  A+ A  +  FDLVLMD+QMP M G Q T  IR  E 
Sbjct: 679  NLLLVKTLLGDMGAEVVAVDNGPAALDAVKQHSFDLVLMDVQMPGMDGRQTTEAIRHWEH 738

Query: 865  ARGLAPLRIYALSAAARREDRQRGLVAGMDGYLLKPLQQKDLQEVL---AGL---ARPGQ 918
              G  PL I AL+A A   +++  L +GMD YL KP+  + L +V+    GL   ++P  
Sbjct: 739  TSGSTPLPIIALTAHALANEKRSLLQSGMDDYLTKPISDRQLAQVVLKWTGLVLRSQPQH 798

Query: 919  EEGGFDYGRMLEGADRDV-LQII---GDVFPGLARLEMAAME-------EALAAADWERL 967
             E        L+  D++  L++     D+   +  + + ++E       EA  + D + L
Sbjct: 799  SEPSSQPELSLKVLDKEEGLRLAAGKADLADDMLGMLLQSLEGDRRTIREARQSGDRQAL 858

Query: 968  GRVAHSLRGAAANFGPSPLVQQATEVERLAP--HQAVQPAHLAELRLALEALLQGLQQFD 1025
                H L GA    G   L     + E L    H   + A L EL  A++ L Q +Q  D
Sbjct: 859  IERVHRLHGATRYCGVPQLRNACQQSETLLKQNHPDSETA-LDELDAAIDRLEQVVQVDD 917