Pairwise Alignments

Query, 246 a.a., flagellar motor component from Dechlorosoma suillum PS

Subject, 255 a.a., chemotaxis motA protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  136 bits (342), Expect = 5e-37
 Identities = 77/246 (31%), Positives = 137/246 (55%), Gaps = 3/246 (1%)

Query: 1   MDSISIIGLLLGLGAIIGGQILEGGHLGSLLQPTAAMIVLGGTFGAVLLQSPVSTVVRAF 60
           MD  +IIGL+   G II   ++ GG +       + +IV GG+F  V+++  +   + A 
Sbjct: 1   MDLATIIGLVGSFGFIIWSMVISGGVM-MFYDLASVVIVFGGSFFVVMMKFNLKQFLGAV 59

Query: 61  KMLKWVWVPPAVNHAWMINSISDWSHVSRREGLLALEGFIAQLRDPFIQKGLQLLVDGAE 120
           K+    ++        +I      +  +R+ G LALE   AQ+ + F+QK + +LVDG +
Sbjct: 60  KIAAKAFIFKIDRPEDLIEQSVTMADAARKGGFLALEE--AQISNSFMQKAVDMLVDGHD 117

Query: 121 PERLREVLEVEIGTYEEELKAGAKFWESAGGFSPTIGIIGAVMGLIHVMENLSDPSKLGA 180
            E +R  LE +I   E+  + G   + +     P +G+IG ++GL+ ++ N+SDP  +G 
Sbjct: 118 GEVVRAALEKDITLTEDRHRIGIAIFRAFADVGPAMGMIGTLVGLVAMLANMSDPKSIGP 177

Query: 181 GIAVAFVATIYGVGMANLVLIPMSTKLKAHIARLVTLREMLVDGLVGIANGDNPRIIESR 240
            +AVA + T+YG  +AN+V IP++ KL   +   +  R +++D ++ I +G NPR+IE  
Sbjct: 178 SMAVALLTTLYGAVLANMVCIPIADKLSLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEGF 237

Query: 241 LQGYVS 246
           L+ Y++
Sbjct: 238 LKNYLA 243