Pairwise Alignments

Query, 267 a.a., ABC-type Co2+ transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 272 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  152 bits (383), Expect = 1e-41
 Identities = 96/268 (35%), Positives = 146/268 (54%), Gaps = 14/268 (5%)

Query: 9   IAALLATALVPAAQAHNAWLLPS----STVLSKAQWITVDAAVANDLFFFNHNALNLDNL 64
           +A + A  + P A +H+ W+LPS    S   ++A WIT D + +N +F  +   +   ++
Sbjct: 6   VALVSALCISPFASSHDRWILPSHYNVSAESNEAVWITSDVSASNQVFMVD-KPVTASDV 64

Query: 65  TVTAPDGSKVAPENLAKGKLRSVFDLNLTQAGTYRVAV-VNAGIMASFKLKGEPK--RWR 121
            V  PDG   +P +   G  +SVFD+ L Q GTY+    V     + +K+KG+ +  R R
Sbjct: 65  KVYLPDGKPSSPSSSYTGGRKSVFDVQLLQDGTYKFEKEVTPRYFSVYKVKGKEEVVRSR 124

Query: 122 GSAEAFAREIPAEAEELNVNEMAGRNETFVTVGKPS--ALAPIGKGLELVPVTHPNDLVN 179
              +A A  +P +A +L  +    R ET+VT  KP+   LAP G+ LELVP+THP D+V 
Sbjct: 125 LDKKATAAVMPKDAYDLKGSLTVARVETYVTRNKPTDKVLAPKGEYLELVPITHPADIVE 184

Query: 180 GEAATFQMLLDGKPAAGLEVTVTKGATRYRNQLGEMKLKTGADGKFSVTFPEAGMYWLDA 239
            E AT Q + DGKP  G+ V + K  + YRN+  E+ L +  +GK ++T P AG Y L A
Sbjct: 185 NEPATLQFVYDGKPVEGVSVAIMKDGSLYRNKPEEISLTSDKEGKVAMTLPAAGRYLLHA 244

Query: 240 ELK----DSKTSVKAAKERRVTYAATLE 263
            ++    D   + K   E  +T+ A LE
Sbjct: 245 SIERPSPDKSLADKTVSEIFLTFEAGLE 272