Pairwise Alignments

Query, 386 a.a., ABC-type transport system, involved in lipoprotein release, permease component from Dechlorosoma suillum PS

Subject, 420 a.a., LolC/E family lipoprotein releasing system, transmembrane protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 54.3 bits (129), Expect = 6e-12
 Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 52/293 (17%)

Query: 117 EYLLSDDERTAFARDRKGAVVGRKLAAQYGFKVGDVVQLKGTIFPG----------TWEF 166
           E  +  D   A  +D    V+GR L  + G   GD + L      G          + +F
Sbjct: 134 ESYMPTDAWQALGQDENAIVLGRSLMEKLGLNEGDALVLFVPDLSGRQNGKLGATRSHKF 193

Query: 167 VIRGIY-TGRDAKTDVAQMLFHWDYLNEVAKVRYPRRQNQVGVYVVTIDDPGRAAELSRL 225
           V+RG Y  G + +   A       Y +     R       V    + +DD  +A +L R 
Sbjct: 194 VVRGSYHLGGELELVTA-------YASMAHLARVLEMGEDVSGVRIAVDDVFKAPKLIRE 246

Query: 226 IDAEFRNSAAETLTETEKAFQLSFVSMTEAI---VVAIRIVSYVVIAIILAV----MANT 278
           +            T+++  +   +      +   +  +R + Y+V+A+++AV    + +T
Sbjct: 247 LG----------FTQSQYLYMSDWTRTQGHLYQDIQLVRTLMYLVLALVIAVACFNIVST 296

Query: 279 MAMTVRERTSEYATLKALGFGPG------FVQGLIFGESVAIAAIGGGLGIALTFPAAAA 332
           + M VR++TSE A L  +G           V G I G    +  +  G+ +AL     A 
Sbjct: 297 LVMAVRDKTSEIAILMTMGLRRSAIVLVFMVHGAISGLLGTLLGVSAGVLVALNLSGLAK 356

Query: 333 FAQ-AMGTLF---PIFFVS-------GTTVLLQAACALGVGLIAAWFPSRRAA 374
            A+ A+G       ++F+        G  V + AA AL + L+A  +P+ +A+
Sbjct: 357 AAESALGVQLLSSDVYFIDFLPSELHGQDVAVVAAMALLMSLLATLYPAYKAS 409