Pairwise Alignments

Query, 454 a.a., putative efflux protein, MATE family from Dechlorosoma suillum PS

Subject, 444 a.a., Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps from Pseudomonas fluorescens FW300-N2E2

 Score =  264 bits (675), Expect = 4e-75
 Identities = 154/421 (36%), Positives = 226/421 (53%), Gaps = 3/421 (0%)

Query: 24  AWPILVAQLASMGLMLIDTALLGHYGAADLAAVAIGGGIYIAVIMACAGVLQAVAPVVAH 83
           A PI+VAQLA+  +  +D  + G  G  DLAAVA+G  I++ V +   G L A  P VA 
Sbjct: 5   ALPIMVAQLATTAMGFVDAVMAGRVGPRDLAAVALGNSIWVPVFLLMTGTLLATTPKVAQ 64

Query: 84  LHGAGRHGEIAAALQQAFWVALVLAVPACLLMRFPDPLLAMATMEPAVEAKTRAYLDLLA 143
             GAG   EI   ++QA W+ALV+ + A L +   +P+L +  ++P +      YL  + 
Sbjct: 65  RFGAGTFAEIGPLVRQALWLALVVGLIASLALFSAEPILHIMNVDPELIGPCMEYLRGIG 124

Query: 144 WGLPLVLLYRTLFAFANALGHSRPFMLISLATTALHLPLSWCLIQGRWGGPPLGVEGTGW 203
            GLP V LY  L  F++ LG +RP M++ L   AL++PL++  I G  G P +G  G GW
Sbjct: 125 TGLPAVALYHVLRCFSDGLGRTRPAMVLGLCGLALNIPLNYIFIYGHLGVPAMGGVGCGW 184

Query: 204 STLIIVGVGFFCGFAYLRRSAALAPLALLGRWHRPQWVRLRELLRLGLPMGFSNLVEISA 263
           +T I++ V       + R + A     L  R+  PQW  ++ LL +GLP+G +   E S 
Sbjct: 185 ATAIVMWVMALGMAGWARWAPAYQSSRLFSRFDWPQWAVIKRLLGIGLPIGIAVFAESSI 244

Query: 264 FTLIALFIAREGATVVAGHRIVANLAALLYMLPLAVAIATLARVGRAAGARDQAGMERAV 323
           F +IAL I   GATVVAGH+I  N ++L++M+P ++ +A   RVG+A G         A 
Sbjct: 245 FAVIALLIGSLGATVVAGHQIALNFSSLVFMIPYSLGMAVTVRVGQALGRAQPREARFAA 304

Query: 324 GAGMVLATGLSLLFGGLLWWGAGPLVGAATGDGRVAAVAVGLVGYLAAYQLFDAIQTVAG 383
           G GM  A   + L   L++   GP+    T D  V  VA  L+ Y A +Q  DAIQ  A 
Sbjct: 305 GVGMGTALAYACLSASLMFALRGPIAAIYTADPVVIEVASMLIVYAALFQFSDAIQVTAA 364

Query: 384 FSLRGCKITFLPMLIHTLCFWGVGLGGGWWLA---YGSPAMGVAGYWAASTASLVLAAVL 440
            +LRG + T + M++    +WG+GL  G+ L    +   A G +G W      L  AA++
Sbjct: 365 GALRGYQDTRVTMILTLFAYWGIGLPVGYALGLTDWLGAASGPSGLWQGLIVGLSCAALM 424

Query: 441 L 441
           L
Sbjct: 425 L 425