Pairwise Alignments

Query, 1320 a.a., ATP-dependent helicase HrpA from Dechlorosoma suillum PS

Subject, 1289 a.a., ATP-dependent helicase HrpA (RefSeq) from Shewanella amazonensis SB2B

 Score = 1094 bits (2830), Expect = 0.0
 Identities = 600/1303 (46%), Positives = 837/1303 (64%), Gaps = 55/1303 (4%)

Query: 28   CLTQDRPRLRALSRSAGQPGPHAEKAKADYEALLARSRAACAEWAGRL---PKPEYAEDL 84
            C   D  R+R   R   + G    KA A +E L  R+ AA A+   RL   P+  Y ++L
Sbjct: 16   CYQSDVARIRRELRDIERLGDETAKAAA-FERLAERAEAAKAKVDARLSARPRIHYPDNL 74

Query: 85   PVNGRREEIKALIEHNQVVIVCGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAARS 144
            PV+ +R++I   I  +QVVIV GETGSGKTTQLPKICLELGRG+ GLIGHTQPRRLAARS
Sbjct: 75   PVSQKRDDIAEAIAKHQVVIVAGETGSGKTTQLPKICLELGRGSRGLIGHTQPRRLAARS 134

Query: 145  VAARVAQELQTQIGAGVGVKIRFQDRSGPQSYLKLMTDGILLAETQTDPYLNAYDTIIID 204
            VA RVA ELQ+ +G  VG K+RF D     SY+KLMTDGILLAE  +D YLN YDT+IID
Sbjct: 135  VATRVADELQSPLGEAVGFKVRFADAINENSYIKLMTDGILLAELSSDKYLNQYDTLIID 194

Query: 205  EAHERSLNIDFLLGYLKQLLAKRKDLKVIITSATIDAERFAQHFAQHGKPAPVIEVSGRL 264
            EAHERSLNIDF+LGYLKQLL +R DLKVIITSATID +RF+ HF +    APVIEVSGR 
Sbjct: 195  EAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDVDRFSTHFDK----APVIEVSGRT 250

Query: 265  YPVEVRYRPVTPLEEDQEERDLYDAIVDAVHELGREGPGDVLVFLPGEREIREAAEALRK 324
            YPVE RYRP+  +++D+ + DL D I +AV EL  EGPGD+L+F+ GEREIR+ AE L +
Sbjct: 251  YPVETRYRPL--VKDDEPDLDLMDGIFEAVDELMAEGPGDILIFMNGEREIRDTAEQLSR 308

Query: 325  HHFPGPQPEILPLFSRLSAAEQDRVFKTGGGRRVVLATNVAETSLTVPGIRYVVDTGLAR 384
              +     E+LPL++RLS  EQ +VFK+  GRR+VLATNVAETSLTVPGIRYV+D G AR
Sbjct: 309  RQY--RDTEVLPLYARLSYGEQSKVFKSHTGRRIVLATNVAETSLTVPGIRYVIDPGTAR 366

Query: 385  VKRYSYRNKVEMLQVERVSQAAARQRAGRCGRVAAGVCIRLYDEADFNARGEFTDPEILR 444
            + RYSYR KV+ L +E +SQA+A QR GRCGRV  G+CIRLY+E DF +R EFTDPEILR
Sbjct: 367  ISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYEETDFLSRPEFTDPEILR 426

Query: 445  SSLAGVILRMKALKLTDVESFPFIEAPPPKAINDGYSLLQELGGLDEDN---RLTDVGRG 501
            ++LA VIL+M A+ L D++ FPFI+ P  + I DG+ LL+EL  +       ++T +GR 
Sbjct: 427  TNLASVILQMLAIGLGDIKGFPFIQPPDERHIKDGFLLLEELQAIKLKKGLPQMTPLGRK 486

Query: 502  LAKLPLDPRIARMIVAARDRGCLKEVLVIAAALSVQDPRERPQERLQAADEKHRQFADEK 561
            LA +PLDPR+ARM++ A DRG L E LV+ +ALS+QDPRERP E+ QAADE H +FAD+ 
Sbjct: 487  LAHVPLDPRLARMVIEAADRGALHEALVVTSALSIQDPRERPLEKKQAADEAHSRFADKD 546

Query: 562  SEFLSWLKLWNWFEEQARHLSGRKLAEACKERFLSYLRMREWREVYNQIHAMVTELGWRE 621
            S+F+S L LWN+ +EQ + LS  +  + CK+ +L+YLR+REW+++Y Q+   V EL  + 
Sbjct: 547  SDFVSLLNLWNYIKEQQKALSASQFRKLCKQEYLAYLRVREWQDLYTQVRQSVHELKLKL 606

Query: 622  NEIPATYEPIHKALLTGLLGNIGCKSDDSSHYLGARGIRFLIHPGSPLQKKAGKWVVCAE 681
            N +PA Y+ +H+ALL+GLL ++G K D+++ YLGAR  RF + PGSPL KK  KW+V AE
Sbjct: 607  NSVPADYDSLHRALLSGLLSHVGFK-DNNNEYLGARNRRFYVFPGSPLAKKGPKWIVAAE 665

Query: 682  LTETTKLYARCLARIEPEWLEEVGAHLIRKSYFDPHWEKKAMQAVAYERSTLHGIVVNPK 741
            LTET++L+AR  A+IEPEWLEE+ AHLI+K + +P +E      VA+E   L+G+ V  +
Sbjct: 666  LTETSRLFARGCAKIEPEWLEELAAHLIKKQHNEPQFEANQGAVVAFENQVLYGLTVVNR 725

Query: 742  KRVNFGPMNPEEARLLFIRQGLVGGEINEDFVRRWPFYQHNQKAIRDIENLEHKQRRQDV 801
            ++V +GP+N  EAR +FIR  L  G++      R  F+ HNQK + ++E+LEHK RR+D+
Sbjct: 726  RKVQYGPINAIEAREIFIRSALAEGQLK----TREAFFLHNQKLLEEVESLEHKSRRRDI 781

Query: 802  LVDDELIFAFYDHLIPSGIYNGADFDKWRKEAERENQKLLFLQKEDLMRHEAAGVTTDAF 861
            LVD++++F FY+  +P GIYN      W KEA R+  +LL   ++ L   +   ++   F
Sbjct: 782  LVDEQVLFDFYNERLPEGIYNAPKLFSWWKEARRKQPELLNFNEDMLYARQTGHISKLDF 841

Query: 862  PPQMRLSGVDYALTYHFEPGSPRDGVTLVLPLAQLNQVPANRSEWLVPGLLKEKVVQLVK 921
            P       + +AL+YHFEPG+  DGV++ +P+A LNQV  +  ++LVPGL +EK + L+K
Sbjct: 842  PDVWHQGNLSFALSYHFEPGAEDDGVSVHIPVALLNQVEDSGFDFLVPGLREEKCIALIK 901

Query: 922  TLPQRIRAKLVPVPEFAEEFIAWVGNDEKRMAPGIIAPLIDFIFESRGLNARGWAVTPDA 981
            +LP+ +R   VP P++A   +          A  +  PL++ +   + L   G  V+ + 
Sbjct: 902  SLPKSLRRNFVPAPDYARAAV---------QAMSLDLPLLESL-SKQLLRMTGTRVSGED 951

Query: 982  FRPGELPAHFSMNFKLVDEHGRQLDMSRSLAQLRGEWGREARQEFQELHETPSEFTGLTD 1041
            F   ELP H  M+FK+ D+HG+ +   R L  L+        +  +++ ++  E  GLT+
Sbjct: 952  FVLTELPKHLLMHFKIEDDHGKLVGEGRDLDALKASLQGVVAKAIRQVAKSGIEQAGLTE 1011

Query: 1042 WTFGKLPELMEVAVGGQMVIGYPGLTEDGETVSLRVYDSQEEALAAHRLGLSRLFQLQLK 1101
            W+   LP   +   G   V  +P L ++ E+V+++++D + +A  AH  G+ RL  + + 
Sbjct: 1012 WSIDDLPAQFQRKKGNYEVKAFPALVDEKESVAVKLFDDEHQAQKAHAQGVRRLLLINIP 1071

Query: 1102 EQVKYFEKNLPGLTQMAMQFMSLGSSDDLRQQLVSVIFERACLVEPWPEDAESFKARCAE 1161
              VK+ ++ LP   ++AM F   G    L + ++     +         D +  + R   
Sbjct: 1072 SPVKHLQQALPNKAKLAMYFNPFGQVQLLIEDIIDAAVAQIL-------DEQRLEVRTKA 1124

Query: 1162 G--------KNRLGLLAQEICRLVGLVLTEWQALVKKLPA--FKPFPGAVQDIEKQIGRL 1211
            G        +  L  +A++I   V  +LT    + K+L          A+ DI+ Q+ RL
Sbjct: 1125 GFDVARDAVRADLNSVAEQISLKVEQILTLHNQIKKRLKGKISLDIAFAMSDIQTQLDRL 1184

Query: 1212 IHKRFVLETPFERLQHFPRYLKAAAMRLDKLKANPARD-VQLLADYSTLWTQYERRALQL 1270
            ++K FV +    RL    R+LKA   RL+KL  +P RD +QLL+ +       +    QL
Sbjct: 1185 VYKGFVADCGHARLSDIIRFLKAIEHRLEKLPVDPVRDKLQLLSIHKV----EQALEAQL 1240

Query: 1271 AKQGVSDP---QLEQFRWLLEELRVNLFAQELKTPVPVSVKRL 1310
            AK   S P    L + RWL+EELRV+LFAQ L T VP+S KR+
Sbjct: 1241 AKVPKSQPVPEHLLEARWLIEELRVSLFAQVLGTSVPISEKRV 1283