Pairwise Alignments

Query, 1320 a.a., ATP-dependent helicase HrpA from Dechlorosoma suillum PS

Subject, 1293 a.a., ATP-dependent helicase HrpA (RefSeq) from Shewanella sp. ANA-3

 Score = 1105 bits (2859), Expect = 0.0
 Identities = 599/1273 (47%), Positives = 822/1273 (64%), Gaps = 48/1273 (3%)

Query: 50   AEKAKADYEALLARSRAACAEWAGRLPKPEYAEDLPVNGRREEIKALIEHNQVVIVCGET 109
            AE+A+A +E +  R +A         PK +Y ++LPV+G REEI   I  NQVVI+ GET
Sbjct: 50   AEQAQAAFEKVEQRLKAR--------PKIQYPDNLPVSGMREEIAKAISENQVVIIAGET 101

Query: 110  GSGKTTQLPKICLELGRGAAGLIGHTQPRRLAARSVAARVAQELQTQIGAGVGVKIRFQD 169
            GSGKTTQLPKICLELG G+ G IGHTQPRRLAARSVA RVA+ELQ+ +G  VG K+RF D
Sbjct: 102  GSGKTTQLPKICLELGLGSRGFIGHTQPRRLAARSVATRVAEELQSPLGELVGFKVRFAD 161

Query: 170  RSGPQSYLKLMTDGILLAETQTDPYLNAYDTIIIDEAHERSLNIDFLLGYLKQLLAKRKD 229
                +SY+KLMTDGILLAE  +D YL+ YDTIIIDEAHERSLNIDF+LGYLKQ+L KR D
Sbjct: 162  ALKSESYIKLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPD 221

Query: 230  LKVIITSATIDAERFAQHFAQHGKPAPVIEVSGRLYPVEVRYRPVTPLEEDQEERDLYDA 289
            LK+IITSATID ERF++HF      AP+IEVSGR YPVE RYRP+  +++ + + D  + 
Sbjct: 222  LKIIITSATIDVERFSKHF----NNAPIIEVSGRTYPVETRYRPL--VQDTEADLDQIEG 275

Query: 290  IVDAVHELGREGPGDVLVFLPGEREIREAAEALRKHHFPGPQPEILPLFSRLSAAEQDRV 349
            I  AV EL  EG GD+L+F+ GEREIR+ AE L + ++     EILPL++RLS  EQ +V
Sbjct: 276  IFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNY--RDTEILPLYARLSYGEQSKV 333

Query: 350  FKTGGGRRVVLATNVAETSLTVPGIRYVVDTGLARVKRYSYRNKVEMLQVERVSQAAARQ 409
            F +  GRR+VLATNVAETSLTVPGIRYV+D G AR+ RYSYR KV+ L +E +SQA+A Q
Sbjct: 334  FSSHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 393

Query: 410  RAGRCGRVAAGVCIRLYDEADFNARGEFTDPEILRSSLAGVILRMKALKLTDVESFPFIE 469
            R GRCGRV  G+CIRLYDEADFN+R  FTDPEILR++LA VIL+M A+ L D+ +FPFIE
Sbjct: 394  RQGRCGRVGPGICIRLYDEADFNSRPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIE 453

Query: 470  APPPKAINDGYSLLQELGGLDEDNR---LTDVGRGLAKLPLDPRIARMIVAARDRGCLKE 526
             P P+ I DG+ LL+EL  + +      LT +GR L+++P+DPR+ARM+V +   GCL+E
Sbjct: 454  PPDPRHIRDGFLLLEELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVVESHQLGCLQE 513

Query: 527  VLVIAAALSVQDPRERPQERLQAADEKHRQFADEKSEFLSWLKLWNWFEEQARHLSGRKL 586
            VLVIAA LS+QDPRERP ++ QA+DE HR+FAD  S+F+SW+ LW   +EQ + LS  + 
Sbjct: 514  VLVIAAGLSIQDPRERPMDKKQASDEAHRRFADPHSDFVSWVNLWQHLKEQQKELSASQF 573

Query: 587  AEACKERFLSYLRMREWREVYNQIHAMVTELGWRENEIPATYEPIHKALLTGLLGNIGCK 646
             + C++ +L+YLR+REW+++Y Q+   V +L WR NE PA Y+ +H+ALL+GLL +IG K
Sbjct: 574  RKKCRDEYLAYLRVREWQDLYTQLKQAVHDLKWRLNETPANYDALHRALLSGLLSHIGFK 633

Query: 647  SDDSSHYLGARGIRFLIHPGSPLQKKAGKWVVCAELTETTKLYARCLARIEPEWLEEVGA 706
             D+++ YLGAR  +F + PGSPL KK  KW++ AELTET+KL+ARC A+IEPEWLE + A
Sbjct: 634  -DNNNEYLGARNRKFFVFPGSPLAKKGPKWIMAAELTETSKLFARCCAKIEPEWLEPLAA 692

Query: 707  HLIRKSYFDPHWEKKAMQAVAYERSTLHGIVVNPKKRVNFGPMNPEEARLLFIRQGLVGG 766
            HLI+K++ +PH+E K    +A+E   L+G+ V  ++RV +GP+NP EAR +FIR  L  G
Sbjct: 693  HLIKKNHLEPHFEAKQGSVIAFENQVLYGLTVVHRRRVQYGPINPVEAREIFIRSALAEG 752

Query: 767  EINEDFVRRWPFYQHNQKAIRDIENLEHKQRRQDVLVDDELIFAFYDHLIPSGIYNGADF 826
            ++      +  F+  NQK + D+E LEHK RR+D+LVD++++  FY+  IP GIYN   F
Sbjct: 753  QLQ----TKEAFFLANQKLLEDVEALEHKSRRRDILVDEQVLMDFYEPRIPEGIYNAPKF 808

Query: 827  DKWRKEAERENQKLLFLQKEDLMRHEAAGVTTDAFPPQMRLSGVDYALTYHFEPGSPRDG 886
              W KEA R    LL   K  LM+  A  ++   FP       +   L+YHF+P +  DG
Sbjct: 809  FSWWKEARRTQPDLLDFNKSLLMQRSADHISALDFPDTWHKGNIRLQLSYHFDPAASDDG 868

Query: 887  VTLVLPLAQLNQVPANRSEWLVPGLLKEKVVQLVKTLPQRIRAKLVPVPEFAEEFIAWVG 946
            V++ +P+A LNQ+     +WLV G+ +EK V L+K+LP+ +R   VP P++A   +    
Sbjct: 869  VSVHIPVALLNQIDDTDFDWLVAGMREEKCVALIKSLPKGLRRNFVPAPDYARACV---- 924

Query: 947  NDEKRMAPGIIAPLIDFIFESRGLNARGWAVTPDAFRPGELPAHFSMNFKLVDEHGRQLD 1006
               + M P   A L+D + +   L   G  V P+ F   ++PAH  MNFK+ D+ G+ + 
Sbjct: 925  ---QAMQP-FSASLLDAMCKQL-LRMSGTRVNPEDFDVTQMPAHLQMNFKIEDDKGKLVA 979

Query: 1007 MSRSLAQLRGEWGREARQEFQELHETPSEFTGLTDWTFGKLPELMEVAVGGQMVIGYPGL 1066
              R L  L+ E      +  +++ +   E   LT+W+FG LP+  E   G   V  +P L
Sbjct: 980  QGRVLDTLKAELQGVVAKAIRQVADKGIEKEALTEWSFGDLPKQFEQRKGNYQVRAFPAL 1039

Query: 1067 TEDGETVSLRVYDSQEEALAAHRLGLSRLFQLQLKEQVKYFEKNLPGLTQMAMQFMSLGS 1126
             ++ ++V+++++D + EA  AHR GL RL  L +   VK+ ++ LP   ++AM F   G 
Sbjct: 1040 IDNKDSVAIKLFDDEFEAQTAHRQGLRRLLLLNIPSPVKHLQQALPNKAKLAMYFNPFGQ 1099

Query: 1127 ----SDDLRQQLVSVIFERACLVEPWPEDAESFKARCAEGKNRLGLLAQEICRLVGLVLT 1182
                 DD+    V  + +   L      DA  F+      +  L   A++I   V  +LT
Sbjct: 1100 VQILIDDIIAAAVQQLLDEKALD---VRDAAQFEQAKDWVRQELNPTAEQIALKVEQILT 1156

Query: 1183 EWQALVKKLPA--FKPFPGAVQDIEKQIGRLIHKRFVLETPFERLQHFPRYLKAAAMRLD 1240
             +Q + K+           A+ DI+ Q+ +L+ K FV    + RL    RYLKA   R+D
Sbjct: 1157 LYQGIKKRTKGKISLDIAFAMSDIQSQLDQLVFKGFVEACGWNRLADVARYLKAIETRID 1216

Query: 1241 KLKANPARDVQLLADYSTLWTQYERRALQLAKQGVSDP---QLEQFRWLLEELRVNLFAQ 1297
            KL  +P RD        ++    E  A QLAK   S P    L + RW++EE RV+ FAQ
Sbjct: 1217 KLPVDPTRD---RLHMQSITKVQEALAAQLAKVPRSQPVPAALIEARWMIEEYRVSCFAQ 1273

Query: 1298 ELKTPVPVSVKRL 1310
             L T  P+S KR+
Sbjct: 1274 ALGTAYPISEKRI 1286