Pairwise Alignments

Query, 1044 a.a., heavy metal efflux pump, cobalt-zinc-cadmium from Dechlorosoma suillum PS

Subject, 1054 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Pseudomonas stutzeri RCH2

 Score = 1169 bits (3023), Expect = 0.0
 Identities = 579/1046 (55%), Positives = 786/1046 (75%), Gaps = 13/1046 (1%)

Query: 1    MLAKIIEWSGRNRFLVLLATLFIIVAGVVAVVRTPLDALPDLSDVQVIVYTEYPGQAPQV 60
            M+A II WS  NRFL+LLAT+F +  GV +V  T +DALPDLSDVQVI+ T YPGQAP++
Sbjct: 1    MIAAIIRWSVANRFLILLATVFAVAWGVWSVKNTAVDALPDLSDVQVIIRTPYPGQAPRI 60

Query: 61   VEDQVTYPLTSAMLSVPKSKVVRGFSFFGASFVYIIFEDGTDIYWARSRVLEYLNFAAGR 120
            VE+QVTYPLT+ MLSVP +K VRG+SFFG S+VY++FEDGTD+YWARSRVLEYL+    R
Sbjct: 61   VENQVTYPLTTTMLSVPGAKTVRGYSFFGDSYVYVLFEDGTDLYWARSRVLEYLSQVQSR 120

Query: 121  MPKGVTPQIGPDATGVGWVYQYAVLAKN--KTLAELRTLQDWYLRYQLTKAHGVAEVASI 178
            +P    P +GPDATGVGW+YQYA++ +     L++LR+LQDW+LRY+L     VAEVA I
Sbjct: 121  LPAAAKPALGPDATGVGWIYQYALVDRTGKHDLSQLRSLQDWFLRYELKTLPNVAEVAPI 180

Query: 179  GGFVQTYQVTVDPVKLRSYGIPLSKVSQVIRDSNRDVGGRVVEMAETEYMVRGKGYLRGT 238
            GG V+ YQV +DPV++ S G+   ++++ I ++NR+ GG V+E+AETE+MVR  GYL+  
Sbjct: 181  GGMVKQYQVVLDPVRMASRGVTQQQIAKAIDEANRETGGSVLELAETEFMVRATGYLKTL 240

Query: 239  ADIENLVVKAQGGTPVMIRDIARVELAPDERRGLTELNGEGEVVSGIAMARYGQNALEVI 298
             D   + ++  GG PV + D+A ++L P+ RRG++EL+GEGEVV G+ + R G+NA E I
Sbjct: 241  KDFRAIPLRLDGGVPVTLGDVAHIQLGPEMRRGISELDGEGEVVGGVVILRSGKNARETI 300

Query: 299  HNLKEKIGEISSGLPEGVTIETVYDRSELIHRAIDTLKHTLAEESVIVALVCVVFLLHLR 358
              ++ K+ E+ + LP+GV I T YDRS+LI  A++ L H L EE ++VALVC +FL HLR
Sbjct: 301  AAVQTKLDELKASLPQGVEIVTTYDRSKLIDSAVENLTHKLIEEFIVVALVCAIFLWHLR 360

Query: 359  SALVAILMLPVGVLISFISMRLLGMNSNLMSLGGIAIAIGAMIDAAIVMIENAHKHIERL 418
            S+LVAI+ LP+G+LI+F+ M+  G+N+N+MSLGGIAIAIGAM+DAAIVMIENAHKHIE  
Sbjct: 361  SSLVAIVSLPIGILIAFVIMQRQGINANIMSLGGIAIAIGAMVDAAIVMIENAHKHIEAW 420

Query: 419  PENHSHS-----ERVEAMIAACKEVGPALFFSLLIITVSFLPVFTLEAQEGRLFSPLAYT 473
             + H  S     E  + +  A  EVGPALFFSLLIIT+SF+PVFTLEAQEGRLF PLA+T
Sbjct: 421  HKRHPDSTLKGQEHWKVITDAAVEVGPALFFSLLIITLSFIPVFTLEAQEGRLFGPLAFT 480

Query: 474  KTFSMAGAALLSVTLVPVLMMLFIRGKIMPEAKNPVNRFLIWGYRPIIAWVMRRKTATII 533
            KT++MA AA LSVTLVPVLM  +IRGKI  E +NP+NR LIW Y+P +  V+R    T++
Sbjct: 481  KTYAMAAAAGLSVTLVPVLMGYWIRGKIPDEHRNPLNRGLIWIYKPALDAVLRWPKMTLL 540

Query: 534  AAIVAMLISIYPASKLGSEFMPTLNEGTLLYMPASLPGMSITKAAELLQTQNKIIKSFPE 593
             A++  L  ++PAS+LG EF+P L+EG LLYMP +LPG+S  KA+ELLQ  +++IK+ PE
Sbjct: 541  VAVLVFLTGLWPASRLGGEFLPPLDEGDLLYMPTALPGLSAQKASELLQQTDRLIKTVPE 600

Query: 594  VASVYGKAGRANTATDPAPTEMFETVINLKPESEWRQGMTTDKLIAEMDKALQFPGVSNA 653
            VA V+GKAGRA+TATDPAP EMFET I  KP+ +WR GMT DKL+ E+D+ +Q PG++N 
Sbjct: 601  VAHVFGKAGRADTATDPAPLEMFETTIQFKPKDQWRPGMTPDKLVEELDRTVQVPGLANL 660

Query: 654  WTMPIKARIDMLSTGIRTPIGIKVFGKDLSEMESLAREIETVVKEVPGTTSAFAERITGG 713
            W  PI+ RIDML+TGI++PIG+KV+G DL++++   + +E + K VPG +SA AER+TGG
Sbjct: 661  WIPPIRNRIDMLATGIKSPIGVKVYGTDLAQIDKATQAVEKIAKTVPGVSSALAERLTGG 720

Query: 714  YYLNIEPDRTQLARYGLAVGELQDVIGQALGGEMVTTTVEGRERFGVTVRYPRELRSDPQ 773
             Y++++ DR   ARYGL + ++Q ++  A+GG+ +  TVEG  R+ + +RY RE R    
Sbjct: 721  RYIDVDIDRVAAARYGLNIADVQSIVAGAIGGQTIGETVEGLARYPINLRYGREWRDSIS 780

Query: 774  QIAQQVLVPTADGAMIPLGQLAKVQVAKGTPGIRTENALLSAYIFVDIRDRDIGGYVADA 833
             + + + + T  G+ I LG +AKVQV  G P +++ENA LS +++VD+R RD+   V D 
Sbjct: 781  DL-RNLPIYTPQGSQITLGTVAKVQVTDGPPMLKSENARLSGWVYVDVRGRDMAAVVGDL 839

Query: 834  KKAVAEKVKFPPGYYATWSGQFESMERAIEKMKVVVPVTLLIIFLLLYLNFKRLTETLIV 893
            ++ +++ V+   G   ++SGQFE MERA  K+K+VVP TLLIIF+LLYL F R  E L++
Sbjct: 840  REKISKGVQLESGMSISYSGQFEFMERANAKLKLVVPATLLIIFVLLYLTFGRFGEALLI 899

Query: 894  MLSVPFALVGGVWLMWLLGYNLSVAVAVGFIALAGVAAETGVVMLIYLDHAWEELKTKRR 953
            M ++PFAL GGVW ++LLGYNLSVA  +GFIALAGV+AE GV+ML+YL +AW + +    
Sbjct: 900  MATLPFALTGGVWFLYLLGYNLSVATGIGFIALAGVSAEFGVIMLLYLKNAWTD-RVNAG 958

Query: 954  ASGQEPSLGDLYEAIMEGAVERVRPKMMTVVAIMAGLLPIMWGTGTGSEVMSRIAAPMVG 1013
            A G+    G L +AI EGAV+RVRPK MTV  I+AGLLPI+WG+GTGSE+MSRIAAPMVG
Sbjct: 959  AHGE----GVLLDAIREGAVQRVRPKAMTVAVIIAGLLPILWGSGTGSEIMSRIAAPMVG 1014

Query: 1014 GMISSTILTLAVIPAIYALIKQWRLK 1039
            GMI++ +L+L V+PA Y L+++ +L+
Sbjct: 1015 GMITAPLLSLFVLPAAYLLMRRRQLR 1040



 Score = 54.3 bits (129), Expect = 5e-11
 Identities = 73/333 (21%), Positives = 144/333 (43%), Gaps = 19/333 (5%)

Query: 187  VTVDPVKLRSYGIPLSKVSQVIRDS--NRDVGGRVVEMAETEYMVR-GKGYLRGTADIEN 243
            V +D V    YG+ ++ V  ++  +   + +G  V  +A     +R G+ +    +D+ N
Sbjct: 725  VDIDRVAAARYGLNIADVQSIVAGAIGGQTIGETVEGLARYPINLRYGREWRDSISDLRN 784

Query: 244  LVVKAQGGTPVMIRDIARVELAPDERRGLTELNGEGEVVSG-IAMARYGQNALEVIHNLK 302
            L +    G+ + +  +A+V++      G   L  E   +SG + +   G++   V+ +L+
Sbjct: 785  LPIYTPQGSQITLGTVAKVQVTD----GPPMLKSENARLSGWVYVDVRGRDMAAVVGDLR 840

Query: 303  EKIGEISSGLPEGVTIETVYDRSELIHRAIDTLKHTLAEESVIVALVCVVFLLHLRSALV 362
            EKI +    L  G++I +   + E + RA   LK  +    +I+ ++  +       AL+
Sbjct: 841  EKISK-GVQLESGMSI-SYSGQFEFMERANAKLKLVVPATLLIIFVLLYLTFGRFGEALL 898

Query: 363  AILMLPVGVLISFISMRLLGMNSNLMS-LGGIAIAIGAMIDAAIVMIENAHKHIERLPEN 421
             +  LP  +      + LLG N ++ + +G IA+A G   +  ++M+             
Sbjct: 899  IMATLPFALTGGVWFLYLLGYNLSVATGIGFIALA-GVSAEFGVIMLLYLKNAWTDRVNA 957

Query: 422  HSHSERV---EAMIAACKEVGPALFFSLLIITVSFLPVFTLEAQEGRLFSPLAYTKTFSM 478
             +H E V        A + V P    ++ +I    LP+         + S +A      M
Sbjct: 958  GAHGEGVLLDAIREGAVQRVRPKAM-TVAVIIAGLLPILWGSGTGSEIMSRIAAPMVGGM 1016

Query: 479  AGAALLSVTLVPVLMMLFIRGKI---MPEAKNP 508
              A LLS+ ++P   +L  R ++     +A NP
Sbjct: 1017 ITAPLLSLFVLPAAYLLMRRRQLRVTTQQATNP 1049