Pairwise Alignments

Query, 1044 a.a., heavy metal efflux pump, cobalt-zinc-cadmium from Dechlorosoma suillum PS

Subject, 1048 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 1096 bits (2834), Expect = 0.0
 Identities = 552/1045 (52%), Positives = 755/1045 (72%), Gaps = 13/1045 (1%)

Query: 1    MLAKIIEWSGRNRFLVLLATLFIIVAGVVAVVRTPLDALPDLSDVQVIVYTEYPGQAPQV 60
            ML  II+ S R RF+VL+  L + + G+  + RTPLDALPDLSDVQVI+ T +PGQAPQ+
Sbjct: 1    MLDYIIKSSIRQRFMVLVVALMVTLWGITELKRTPLDALPDLSDVQVIIKTSFPGQAPQL 60

Query: 61   VEDQVTYPLTSAMLSVPKSKVVRGFSFFGASFVYIIFEDGTDIYWARSRVLEYLNFAAGR 120
            VE+QVTYPL++AML+VP +K VRGFS FG S+VY+IFEDGTDIYWARSRVLEYL+    R
Sbjct: 61   VEEQVTYPLSTAMLAVPGAKTVRGFSMFGDSYVYVIFEDGTDIYWARSRVLEYLSQVRTR 120

Query: 121  MPKGVTPQIGPDATGVGWVYQYAVLAK--NKTLAELRTLQDWYLRYQLTKAHGVAEVASI 178
            +P GV P +GPDA+GVGWVY+YA++ +  N  L++L++LQDWYL+ +L    GV+EVA++
Sbjct: 121  LPAGVEPSLGPDASGVGWVYEYALVDRSGNLDLSQLKSLQDWYLKLELQSVEGVSEVATV 180

Query: 179  GGFVQTYQVTVDPVKLRSYGIPLSKVSQVIRDSNRDVGGRVVEMAETEYMVRGKGYLRGT 238
            GG  QTYQ+ ++P KL  Y + ++ +   I  +N + GG VVEMAE EYMVR KGY +  
Sbjct: 181  GGMEQTYQIVLEPDKLAIYKLDIATIKAAITRANSEAGGSVVEMAEAEYMVRAKGYRQTL 240

Query: 239  ADIEN--LVVKAQGGTPVMIRDIARVELAPDERRGLTELNGEGEVVSGIAMARYGQNALE 296
             D     L +    GTP++++D+A +   P  RRG+ EL+GEGEVV GI + RYG+NAL 
Sbjct: 241  DDFREIPLGITTGAGTPLLLKDVATIRKGPASRRGIAELDGEGEVVGGIIVMRYGENALA 300

Query: 297  VIHNLKEKIGEISSGLPEGVTIETVYDRSELIHRAIDTLKHTLAEESVIVALVCVVFLLH 356
             I  +K K+ E+ +GLP+GV I   YDRS+LI  ++D L   + EE ++V LVC++FLLH
Sbjct: 301  TIDAVKAKLDELKAGLPDGVEIVPTYDRSQLIQNSVDNLLTKVVEEMLVVGLVCLLFLLH 360

Query: 357  LRSALVAILMLPVGVLISFISMRLLGMNSNLMSLGGIAIAIGAMIDAAIVMIENAHKHIE 416
             RS LVA+  LP+ +LI+FI M  +G+N+N+MSLGGIAIAIGA++D AIVMIEN HKH+E
Sbjct: 361  ARSTLVAVFTLPLSILIAFIVMNHMGINANIMSLGGIAIAIGAVVDGAIVMIENLHKHLE 420

Query: 417  RLPENH----SHSERVEAMIAACKEVGPALFFSLLIITVSFLPVFTLEAQEGRLFSPLAY 472
                 H    S  E  E +  A  EVGPALFFSLLIIT+SF+PVF LEAQEGRLF+PLAY
Sbjct: 421  HFKRQHEREPSTREHWEVVTQASLEVGPALFFSLLIITLSFIPVFALEAQEGRLFAPLAY 480

Query: 473  TKTFSMAGAALLSVTLVPVLMMLFIRGKIMPEAKNPVNRFLIWGYRPIIAWVMRRKTATI 532
            TKTF+MA A++L++TLVPVLM  FIRGKI  E  NP++RFLI  Y+P +  V+     T+
Sbjct: 481  TKTFAMAAASVLAITLVPVLMGYFIRGKIPSEEANPISRFLIALYKPALNKVLAFPKLTL 540

Query: 533  IAAIVAMLISIYPASKLGSEFMPTLNEGTLLYMPASLPGMSITKAAELLQTQNKIIKSFP 592
            + A++A+   +YPAS++GSEFMP L EG LLYMP +LPG+S  KAAE+LQ  +++IK+ P
Sbjct: 541  LVALLALASVVYPASRMGSEFMPELEEGDLLYMPTALPGISAGKAAEILQQTDRLIKTVP 600

Query: 593  EVASVYGKAGRANTATDPAPTEMFETVINLKPESEWRQGMTTDKLIAEMDKALQFPGVSN 652
            EVA V+GK GRA TATDPAP  M ET I LKP  EWR+G+  + ++ E+ + ++ PG++N
Sbjct: 601  EVARVFGKIGRAETATDPAPLTMLETTIMLKPRQEWREGINLNDIVDELQRTVKVPGLTN 660

Query: 653  AWTMPIKARIDMLSTGIRTPIGIKVFGKDLSEMESLAREIETVVKEVPGTTSAFAERITG 712
            AW  PIK RIDMLSTGI+TP+GIK+ G ++ E++ +   +E ++  +P T SA+AER  G
Sbjct: 661  AWVQPIKTRIDMLSTGIKTPVGIKITGANVDELQQIGANVEAILAALPNTRSAYAERAGG 720

Query: 713  GYYLNIEPDRTQLARYGLAVGELQDVIGQALGGEMVTTTVEGRERFGVTVRYPRELRSDP 772
            G Y++I P     +RYG+ + ++QDV+  A+GG  V  +V+G ER+ + +RYPRELR   
Sbjct: 721  GRYIDIAPKLDVASRYGMTLNDIQDVVRYAIGGMNVGESVQGAERYPINLRYPRELRDSL 780

Query: 773  QQIAQQVLVPTADGAMIPLGQLAKVQVAKGTPGIRTENALLSAYIFVDIRDRDIGGYVAD 832
            +++ + + V T  G  +PLG LA +Q++ G P +++EN  L +++FVDI+   IG Y+  
Sbjct: 781  EKL-RALPVITKSGHYLPLGNLADIQISDGPPMLKSENGRLISWVFVDIQGTSIGEYIQT 839

Query: 833  AKKAVAEKVKFPPGYYATWSGQFESMERAIEKMKVVVPVTLLIIFLLLYLNFKRLTETLI 892
            AK A+  ++  PP Y  +++GQ+E M+R   K+K VVP+ + IIF+LL L F    +  +
Sbjct: 840  AKSALEAELNLPPRYSYSFAGQYEYMQRVDAKLKQVVPLAIGIIFILLMLTFGSGKQASM 899

Query: 893  VMLSVPFALVGGVWLMWLLGYNLSVAVAVGFIALAGVAAETGVVMLIYLDHAWEELKTKR 952
            +MLS+PFALVG  WL++LL YNLSVAVAVG IALAGVAAE GVVML+YL++A ++    R
Sbjct: 900  IMLSLPFALVGSTWLLYLLDYNLSVAVAVGMIALAGVAAEFGVVMLVYLNNAIKD----R 955

Query: 953  RASGQEPSLGDLYEAIMEGAVERVRPKMMTVVAIMAGLLPIMWGTGTGSEVMSRIAAPMV 1012
             A G   +  DL  A++EGAV R+RPK MTV  I  GLLPIMWG G+G+EVM +IAAPMV
Sbjct: 956  DALGHYHNESDLKAALVEGAVMRIRPKAMTVATIFFGLLPIMWGAGSGNEVMQKIAAPMV 1015

Query: 1013 GGMISSTILTLAVIPAIYALIKQWR 1037
            GGM+++ +L+L V+PA+Y L+ + R
Sbjct: 1016 GGMVTAPLLSLFVLPALYLLVYRKR 1040